Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
ATR_00019G01450
(Amborella trichopoda)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | ATR_00019G01450 | 1 |  |
| Tree-based ortholog | ATR_00019G01450 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | ATR_00019G01450 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Arabidopsis lyrata | Orthologous gene family | 1-to-1 | AL1G16280 | 1 | |
| Tree-based ortholog | 1-to-1 | AL6G11030 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL6G11030 | 1 | ||
| Arabidopsis thaliana | Orthologous gene family | 1-to-1 | AT1G15420 | 1 | |
| Tree-based ortholog | 1-to-1 | AT5G11240 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT5G11240 | 1 | ||
| Beta vulgaris | Orthologous gene family | 1-to-1 | BV9G16060 | 1 | |
| Tree-based ortholog | 1-to-1 | BV3G08670 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV3G08670 | 1 | ||
| Brassica rapa | Orthologous gene family | 1-to-many | BR06G10850 BR08G27070 | 2 | |
| Tree-based ortholog | 1-to-1 | BR09G47550 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | BR02G05440 BR10G22450 | 2 | ||
| Capsella rubella | Orthologous gene family | 1-to-1 | CRU_001G14540 | 1 | |
| Tree-based ortholog | 1-to-1 | CRU_006G09480 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_006G09480 | 1 | ||
| Carica papaya | Orthologous gene family | 1-to-1 | CP00336G00030 | 1 | |
| Tree-based ortholog | 1-to-1 | CP00336G00030 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00336G00030 | 1 | ||
| Chlamydomonas reinhardtii | Tree-based ortholog | 1-to-1 | CR12G12220 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR12G12220 | 1 | ||
| Citrullus lanatus | Orthologous gene family | 1-to-1 | CL09G02290 | 1 | |
| Tree-based ortholog | 1-to-1 | CL09G02290 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL06G04620 | 1 | ||
| Citrus sinensis | Orthologous gene family | 1-to-1 | CS00153G00170 | 1 | |
| Tree-based ortholog | 1-to-1 | CS00153G00170 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00016G00760 | 1 | ||
| Cucumis melo | Orthologous gene family | 1-to-1 | CM00060G00410 | 1 | |
| Tree-based ortholog | 1-to-1 | CM00060G00410 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00060G00410 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | 1-to-1 | EG0009G17670 | 1 | |
| Tree-based ortholog | 1-to-1 | EG0009G17670 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0001G10570 | 1 | ||
| Fragaria vesca | Tree-based ortholog | 1-to-1 | FV3G36110 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV6G15890 | 1 | ||
| Glycine max | Orthologous gene family | 1-to-many | GM07G03646 GM08G22440 | 2 | |
| Tree-based ortholog | 1-to-many | GM08G22440 GM07G03646 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM07G03646 GM08G22440 | 2 | ||
| Gossypium raimondii | Orthologous gene family | 1-to-1 | GR09G12990 | 1 | |
| Tree-based ortholog | 1-to-1 | GR09G12990 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR09G12990 | 1 | ||
| Malus domestica | Orthologous gene family | 1-to-1 | MD15G030670 | 1 | |
| Tree-based ortholog | 1-to-many | MD00G077730 MD13G014710 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD00G077730 | 1 | ||
| Manihot esculenta | Orthologous gene family | 1-to-1 | ME04151G00610 | 1 | |
| Tree-based ortholog | 1-to-1 | ME04151G00610 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME04151G00610 | 1 | ||
| Medicago truncatula | Orthologous gene family | 1-to-1 | MT4G011300 | 1 | |
| Tree-based ortholog | 1-to-1 | MT4G011300 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT4G011300 | 1 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | 1-to-1 | OS01G46060 | 1 | |
| Tree-based ortholog | 1-to-1 | OS01G46060 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS01G46060 | 1 | ||
| Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL05G00390 | 1 | |
| Physcomitrella patens | Tree-based ortholog | 1-to-1 | PP00130G00910 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PP00130G00910 | 1 | ||
| Populus trichocarpa | Orthologous gene family | 1-to-many | PT01G17310 PT01G17330 PT03G06090 | 3 | |
| Tree-based ortholog | 1-to-many | PT01G17310 PT01G17330 PT03G06090 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT10G00540 | 1 | ||
| Prunus persica | Orthologous gene family | 1-to-1 | PPE_006G06020 | 1 | |
| Tree-based ortholog | 1-to-1 | PPE_001G12100 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_001G12100 | 1 | ||
| Ricinus communis | Orthologous gene family | 1-to-1 | RC29841G00660 | 1 | |
| Tree-based ortholog | 1-to-1 | RC29841G00660 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29841G00660 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | 1-to-1 | SL03G116380 | 1 | |
| Tree-based ortholog | 1-to-1 | SL03G116380 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL03G116380 | 1 | ||
| Solanum tuberosum | Orthologous gene family | 1-to-1 | ST03G029840 | 1 | |
| Tree-based ortholog | 1-to-1 | ST03G029840 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST03G029840 | 1 | ||
| Thellungiella parvula | Orthologous gene family | 1-to-1 | TP1G13790 | 1 | |
| Tree-based ortholog | 1-to-1 | TP6G32320 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP6G32320 | 1 | ||
| Theobroma cacao | Orthologous gene family | 1-to-1 | TC0006G07420 | 1 | |
| Tree-based ortholog | 1-to-1 | TC0004G29240 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0004G29240 | 1 | ||
| Vitis vinifera | Orthologous gene family | 1-to-1 | VV09G06350 | 1 | |
| Tree-based ortholog | 1-to-1 | VV09G06350 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV09G06350 | 1 | ||
| Zea mays | Orthologous gene family | 1-to-1 | ZM06G30200 | 1 | |
| Tree-based ortholog | 1-to-1 | ZM01G12810 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM01G12810 | 1 |