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Integrative Orthology Viewer:
ATR_00016G03530
(Amborella trichopoda)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | ATR_00016G03530 | 1 |  |
| Tree-based ortholog | ATR_00016G03530 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | ATR_00016G03530 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Arabidopsis lyrata | Tree-based ortholog | 1-to-1 | AL5G11560 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL3G02600 | 1 | ||
| Arabidopsis thaliana | Orthologous gene family | 1-to-many | AT3G03300 AT5G20320 | 2 | |
| Tree-based ortholog | 1-to-1 | AT3G03300 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT3G03300 | 1 | ||
| Beta vulgaris | Orthologous gene family | 1-to-1 | BV8G16240 | 1 | |
| Tree-based ortholog | 1-to-1 | BV4G14870 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV4G14870 | 1 | ||
| Brassica rapa | Tree-based ortholog | 1-to-1 | BR02G39730 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR02G39730 | 1 | ||
| Capsella rubella | Orthologous gene family | 1-to-1 | CRU_003G02350 | 1 | |
| Tree-based ortholog | 1-to-1 | CRU_003G02350 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_003G02350 | 1 | ||
| Carica papaya | Tree-based ortholog | 1-to-many | CP40955G00010 CP36105G00010 CP00046G00970 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00123G00500 | 1 | ||
| Chlamydomonas reinhardtii | Tree-based ortholog | 1-to-many | CR02G13390 CR16G12300 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR02G13390 | 1 | ||
| Citrullus lanatus | Orthologous gene family | 1-to-1 | CL06G12680 | 1 | |
| Tree-based ortholog | 1-to-1 | CL03G10250 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL06G12680 | 1 | ||
| Citrus sinensis | Orthologous gene family | 1-to-many | CS00068G00330 CS00367G00030 | 2 | |
| Tree-based ortholog | 1-to-many | CS00367G00020 CS00367G00030 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00367G00030 | 1 | ||
| Cucumis melo | Tree-based ortholog | 1-to-1 | CM00012G00540 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00012G00540 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | 1-to-1 | EG0003G03340 | 1 | |
| Tree-based ortholog | 1-to-1 | EG0002G12040 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0002G12040 | 1 | ||
| Fragaria vesca | Orthologous gene family | 1-to-1 | FV6G00110 | 1 | |
| Tree-based ortholog | 1-to-many | FV6G00110 FV0G18720 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV6G00110 | 1 | ||
| Glycine max | Orthologous gene family | 1-to-many | GM09G02920 GM09G02930 GM13G22450 ... | 4 | |
| Tree-based ortholog | 1-to-many | GM19G44390 GM09G02920 GM09G02930 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM09G02930 GM09G02920 | 2 | ||
| Gossypium raimondii | Orthologous gene family | 1-to-many | GR02G14300 GR09G05330 GR09G37490 | 3 | |
| Tree-based ortholog | 1-to-many | GR09G37490 GR02G14300 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GR02G14300 GR09G37490 | 2 | ||
| Lotus japonicus | Tree-based ortholog | 1-to-many | LJ6G020240 LJ6G020230 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | LJ6G020230 LJ6G020240 | 2 | ||
| Malus domestica | Tree-based ortholog | 1-to-many | MD00G393190 MD15G008920 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD15G008920 MD00G393190 | 2 | ||
| Manihot esculenta | Tree-based ortholog | 1-to-many | ME06711G00120 ME06711G00100 ME06711G00130 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME02871G00200 | 1 | ||
| Medicago truncatula | Orthologous gene family | 1-to-many | MT1G060740 MT2G030490 MT4G116860 | 3 | |
| Tree-based ortholog | 1-to-many | MT8G069975 MT2G030490 MT1G060740 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MT8G069975 MT1G060740 MT2G030490 | 3 | ||
| Oryza sativa ssp. japonica | Tree-based ortholog | 1-to-many | OS09G14610 OS03G38740 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | OS03G38740 OS09G14610 | 2 | ||
| Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL07G03250 | 1 | |
| Physcomitrella patens | Tree-based ortholog | 1-to-many | PP00082G00590 PP00196G00310 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PP00149G00220 | 1 | ||
| Populus trichocarpa | Orthologous gene family | 1-to-many | PT06G18880 PT08G07590 PT10G18140 | 3 | |
| Tree-based ortholog | 1-to-many | PT10G18140 PT08G07590 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT10G18140 PT08G07590 | 2 | ||
| Prunus persica | Orthologous gene family | 1-to-1 | PPE_006G36590 | 1 | |
| Tree-based ortholog | 1-to-many | PPE_003G12850 PPE_003G12860 PPE_003G12840 ... | 4 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_006G36590 | 1 | ||
| Ricinus communis | Orthologous gene family | 1-to-many | RC29737G00420 RC29929G00470 | 2 | |
| Tree-based ortholog | 1-to-1 | RC29929G00470 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29929G00470 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | 1-to-many | SL06G048960 SL07G005030 SL11G008520 ... | 4 | |
| Tree-based ortholog | 1-to-many | SL11G008530 SL11G008520 SL01G013950 ... | 14 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL06G048960 | 1 | ||
| Solanum tuberosum | Orthologous gene family | 1-to-many | ST06G012900 ST07G007080 ST11G010160 | 3 | |
| Tree-based ortholog | 1-to-many | ST11G010170 ST11G010180 ST06G012900 ... | 4 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST06G012900 | 1 | ||
| Thellungiella parvula | Tree-based ortholog | 1-to-many | TP6G09960 TP7G06180 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP6G09960 | 1 | ||
| Theobroma cacao | Orthologous gene family | 1-to-many | TC0005G18820 TC0009G03480 | 2 | |
| Tree-based ortholog | 1-to-1 | TC0005G18820 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0005G18820 | 1 | ||
| Vitis vinifera | Orthologous gene family | 1-to-many | VV04G02970 VV11G00090 | 2 | |
| Tree-based ortholog | 1-to-1 | VV04G02970 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV04G02970 | 1 | ||
| Zea mays | Tree-based ortholog | 1-to-many | ZM05G08380 ZM05G08390 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM01G41740 | 1 |