Integrative Orthology Viewer: ATR_00013G02770 (Amborella trichopoda)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | ATR_00013G02770 ATR_00070G01230 | 2 | |
Tree-based ortholog | ATR_00112G00070 ATR_00050G00660 ATR_00013G02770 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | ATR_00013G02770 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Arabidopsis lyrata | Orthologous gene family | many-to-many | AL1G23500 AL1G37980 AL7G30710 | 3 | |
Tree-based ortholog | many-to-many | AL7G30710 AL7G30690 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL7G30690 | 1 | ||
Arabidopsis thaliana | Orthologous gene family | many-to-many | AT1G22020 AT1G36370 AT4G13890 ... | 4 | |
Tree-based ortholog | many-to-many | AT4G13890 AT4G13930 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT4G13930 | 1 | ||
Beta vulgaris | Orthologous gene family | many-to-1 | BV6G24430 | 1 | |
Tree-based ortholog | many-to-1 | BV3G10920 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV3G10920 | 1 | ||
Brassica rapa | Orthologous gene family | many-to-many | BR05G21520 BR08G05390 BR08G07890 ... | 4 | |
Tree-based ortholog | many-to-many | BR04G06640 BR08G05390 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR04G06640 | 1 | ||
Capsella rubella | Orthologous gene family | many-to-many | CRU_001G20630 CRU_001G32090 CRU_007G27340 ... | 4 | |
Tree-based ortholog | many-to-many | CRU_007G27370 CRU_007G27340 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_007G27340 | 1 | ||
Carica papaya | Orthologous gene family | many-to-1 | CP00049G01160 | 1 | |
Tree-based ortholog | many-to-1 | CP00157G00460 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00157G00460 | 1 | ||
Chlamydomonas reinhardtii | Tree-based ortholog | many-to-1 | CR06G11920 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR06G11920 | 1 | ||
Citrullus lanatus | Orthologous gene family | many-to-many | CL05G10810 CL11G09550 | 2 | |
Tree-based ortholog | many-to-1 | CL06G07840 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL06G07840 | 1 | ||
Citrus sinensis | Tree-based ortholog | many-to-1 | CS00651G00010 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00651G00010 | 1 | ||
Cucumis melo | Orthologous gene family | many-to-many | CM00013G00680 CM00038G00860 | 2 | |
Tree-based ortholog | many-to-1 | CM00043G00930 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00043G00930 | 1 | ||
Eucalyptus grandis | Orthologous gene family | many-to-many | EG0005G05320 EG0005G05360 EG0006G31880 ... | 4 | |
Tree-based ortholog | many-to-many | EG0005G05360 EG0005G05320 EG0006G24030 ... | 5 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0008G21720 | 1 | ||
Fragaria vesca | Orthologous gene family | many-to-many | FV0G33200 FV7G20270 | 2 | |
Tree-based ortholog | many-to-1 | FV4G17190 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV4G17190 | 1 | ||
Glycine max | Orthologous gene family | many-to-many | GM04G43360 GM06G11300 GM08G11490 ... | 5 | |
Tree-based ortholog | many-to-many | GM08G11490 GM05G28490 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM08G11490 GM05G28490 | 2 | ||
Gossypium raimondii | Orthologous gene family | many-to-many | GR05G09210 GR05G24210 GR09G24160 ... | 4 | |
Tree-based ortholog | many-to-many | GR06G22380 GR11G15390 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR11G15390 | 1 | ||
Lotus japonicus | Orthologous gene family | many-to-1 | LJ6G030150 | 1 | |
Tree-based ortholog | many-to-1 | LJ6G002620 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ6G030150 | 1 | ||
Malus domestica | Orthologous gene family | many-to-many | MD00G194780 MD00G309820 MD00G444470 | 3 | |
Tree-based ortholog | many-to-many | MD09G014060 MD12G013420 MD17G017820 ... | 7 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD09G014060 | 1 | ||
Manihot esculenta | Orthologous gene family | many-to-many | ME02421G00880 ME03332G01020 ME06914G01010 ... | 4 | |
Tree-based ortholog | many-to-many | ME04065G00300 ME03332G01020 ME03332G01030 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME03332G01030 | 1 | ||
Medicago truncatula | Orthologous gene family | many-to-many | MT2G006570 MT3G073470 MT8G081510 | 3 | |
Tree-based ortholog | many-to-many | MT8G081510 MT3G084310 MT1G073580 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT3G084310 | 1 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS01G65410 OS05G35440 OS12G22030 | 3 | |
Tree-based ortholog | many-to-1 | OS11G26860 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS12G22030 | 1 | ||
Ostreococcus lucimarinus | Orthologous gene family | many-to-1 | OL03G00930 | 1 | |
Tree-based ortholog | many-to-1 | OL03G00930 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL03G00930 | 1 | ||
Physcomitrella patens | Orthologous gene family | many-to-many | PP00029G00530 PP00201G00220 PP00227G00700 | 3 | |
Tree-based ortholog | many-to-1 | PP00070G00480 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00029G00530 PP00291G00190 | 2 | ||
Populus trichocarpa | Orthologous gene family | many-to-many | PT01G21200 PT02G09020 PT05G17080 | 3 | |
Tree-based ortholog | many-to-many | PT01G32040 PT17G05930 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT17G05930 PT01G32040 | 2 | ||
Prunus persica | Orthologous gene family | many-to-many | PPE_001G51200 PPE_001G51210 | 2 | |
Tree-based ortholog | many-to-1 | PPE_001G15890 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_001G15890 | 1 | ||
Ricinus communis | Orthologous gene family | many-to-many | RC29222G00010 RC29908G01060 | 2 | |
Tree-based ortholog | many-to-1 | RC29629G00860 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29629G00860 | 1 | ||
Solanum lycopersicum | Orthologous gene family | many-to-many | SL01G104000 SL12G098490 | 2 | |
Tree-based ortholog | many-to-many | SL12G098490 SL05G053810 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL05G053810 | 1 | ||
Solanum tuberosum | Orthologous gene family | many-to-many | ST01G040990 ST12G030250 | 2 | |
Tree-based ortholog | many-to-many | ST10G014880 ST08G018870 ST12G030250 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST05G026690 | 1 | ||
Thellungiella parvula | Orthologous gene family | many-to-many | TP1G19530 TP1G30960 TP7G11730 | 3 | |
Tree-based ortholog | many-to-1 | TP7G11730 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP7G11730 | 1 | ||
Theobroma cacao | Orthologous gene family | many-to-many | TC0002G08510 TC0008G11160 | 2 | |
Tree-based ortholog | many-to-many | TC0004G20000 TC0009G04880 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0004G20000 | 1 | ||
Vitis vinifera | Orthologous gene family | many-to-1 | VV18G02870 | 1 | |
Tree-based ortholog | many-to-many | VV05G07300 VV00G07790 | 2 | ||
Anchor point | N/A | VV05G07300 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV18G02870 | 1 | ||
Zea mays | Orthologous gene family | many-to-many | ZM01G27890 ZM03G25430 ZM04G05210 | 3 | |
Tree-based ortholog | many-to-many | ZM08G30670 ZM09G09520 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM04G05210 | 1 |