Integrative Orthology Viewer: ATR_00012G03410 (Amborella trichopoda)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | ATR_00012G03410 ATR_00012G03420 | 2 | |
Tree-based ortholog | ATR_00012G03410 ATR_00012G03420 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | ATR_00012G03420 ATR_00012G03410 | 2 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Arabidopsis lyrata | Tree-based ortholog | many-to-1 | AL1G22260 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AL1G22260 | 1 | ||
Arabidopsis thaliana | Orthologous gene family | many-to-1 | AT2G37820 | 1 | |
Tree-based ortholog | many-to-many | AT2G37780 AT2G37810 AT2G37800 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT2G37820 | 1 | ||
Beta vulgaris | Orthologous gene family | many-to-1 | BV4G05760 | 1 | |
Tree-based ortholog | many-to-1 | BV4G05760 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BV4G05760 | 1 | ||
Brassica rapa | Orthologous gene family | many-to-1 | BR05G07450 | 1 | |
Tree-based ortholog | many-to-many | BR03G18680 BR05G07480 BR03G18690 ... | 5 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BR05G07450 | 1 | ||
Capsella rubella | Orthologous gene family | many-to-1 | CRU_004G19140 | 1 | |
Tree-based ortholog | many-to-1 | CRU_004G19140 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CRU_004G19140 | 1 | ||
Carica papaya | Tree-based ortholog | many-to-1 | CP00062G00910 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00062G00910 | 1 | ||
Citrullus lanatus | Orthologous gene family | many-to-1 | CL04G07770 | 1 | |
Tree-based ortholog | many-to-many | CL04G07770 CL04G07780 CL04G07760 | 3 | ||
Anchor point | N/A | CL04G07760 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CL04G07770 | 1 | ||
Citrus sinensis | Orthologous gene family | many-to-many | CS00280G00020 CS00280G00030 | 2 | |
Tree-based ortholog | many-to-many | CS00280G00020 CS00280G00030 | 2 | ||
Anchor point | N/A | CS00280G00020 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | CS00280G00020 CS00280G00030 | 2 | ||
Cucumis melo | Orthologous gene family | many-to-many | CM00002G00970 CM00002G01010 | 2 | |
Tree-based ortholog | many-to-many | CM00002G01010 CM00002G00970 CM00002G00980 ... | 4 | ||
Anchor point | N/A | CM00002G00970 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CM00002G01010 | 1 | ||
Eucalyptus grandis | Tree-based ortholog | many-to-many | EG0006G30810 EG0006G15780 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | EG0006G15780 | 1 | ||
Fragaria vesca | Tree-based ortholog | many-to-1 | FV5G28020 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | FV2G00520 | 1 | ||
Glycine max | Tree-based ortholog | many-to-many | GM07G19730 GM20G00880 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | GM20G00880 GM07G19730 | 2 | ||
Gossypium raimondii | Orthologous gene family | many-to-1 | GR12G10780 | 1 | |
Tree-based ortholog | many-to-many | GR07G35960 GR03G09340 | 2 | ||
Anchor point | N/A | GR12G10780 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | GR07G35960 | 1 | ||
Lotus japonicus | Tree-based ortholog | many-to-1 | LJ1G059950 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | LJ3G046360 | 1 | ||
Malus domestica | Tree-based ortholog | many-to-1 | MD00G228720 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MD10G010410 | 1 | ||
Manihot esculenta | Tree-based ortholog | many-to-many | ME01012G00050 ME06201G00010 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ME01012G00050 | 1 | ||
Medicago truncatula | Tree-based ortholog | many-to-1 | MT1G034960 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MT1G034960 | 1 | ||
Oryza sativa ssp. japonica | Tree-based ortholog | many-to-many | OS07G42070 OS07G42030 OS07G41930 ... | 5 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS09G31980 | 1 | ||
Physcomitrella patens | Tree-based ortholog | many-to-1 | PP00365G00030 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | PP00365G00030 PP00096G00950 PP00108G00170 | 3 | ||
Populus trichocarpa | Orthologous gene family | many-to-1 | PT10G19820 | 1 | |
Tree-based ortholog | many-to-1 | PT10G19820 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PT10G19820 | 1 | ||
Prunus persica | Tree-based ortholog | many-to-1 | PPE_005G00260 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PPE_005G00260 | 1 | ||
Ricinus communis | Tree-based ortholog | many-to-1 | RC30170G07560 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | RC30170G07560 | 1 | ||
Solanum lycopersicum | Orthologous gene family | many-to-1 | SL09G011270 | 1 | |
Tree-based ortholog | many-to-many | SL00G015760 SL09G011260 SL09G011270 | 3 | ||
Anchor point | N/A | SL09G011260 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SL09G011270 | 1 | ||
Solanum tuberosum | Orthologous gene family | many-to-1 | ST09G008710 | 1 | |
Tree-based ortholog | many-to-many | ST09G008720 ST09G008710 | 2 | ||
Anchor point | N/A | ST09G008700 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ST09G008710 | 1 | ||
Thellungiella parvula | Tree-based ortholog | many-to-1 | TP4G20150 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TP3G29300 | 1 | ||
Theobroma cacao | Orthologous gene family | many-to-many | TC0005G03060 TC0005G03070 | 2 | |
Tree-based ortholog | many-to-many | TC0005G03060 TC0005G03070 | 2 | ||
Anchor point | N/A | TC0005G03060 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | TC0005G03060 TC0005G03070 | 2 | ||
Vitis vinifera | Orthologous gene family | many-to-1 | VV08G13920 | 1 | |
Tree-based ortholog | many-to-1 | VV08G13920 | 1 | ||
Anchor point | N/A | VV08G13920 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV08G13920 | 1 | ||
Zea mays | Orthologous gene family | many-to-1 | ZM02G44750 | 1 | |
Tree-based ortholog | many-to-1 | ZM09G26980 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | ZM07G18120 ZM02G32880 | 2 |