Integrative Orthology Viewer: ATR_00010G04400 (Amborella trichopoda)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | ATR_00010G04400 | 1 | |
Tree-based ortholog | ATR_00010G04400 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | ATR_00010G04400 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Arabidopsis lyrata | Orthologous gene family | 1-to-1 | AL7G38510 | 1 | |
Tree-based ortholog | 1-to-many | AL3G22070 AL2G22740 AL3G00940 | 3 | ||
Anchor point | N/A | AL2G17860 AL7G38510 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL7G38510 | 1 | ||
Arabidopsis thaliana | Orthologous gene family | 1-to-1 | AT5G39785 | 1 | |
Tree-based ortholog | 1-to-many | AT3G20260 AT1G73850 AT3G01175 | 3 | ||
Anchor point | N/A | AT1G69610 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT5G39785 | 1 | ||
Beta vulgaris | Orthologous gene family | 1-to-1 | BV0G54240 | 1 | |
Tree-based ortholog | 1-to-many | BV0G00190 BV5G05360 | 2 | ||
Anchor point | N/A | BV0G54240 BV6G02720 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV0G54240 | 1 | ||
Brassica rapa | Orthologous gene family | 1-to-1 | BR04G09160 | 1 | |
Tree-based ortholog | 1-to-many | BR03G36270 BR05G23370 BR07G29600 ... | 4 | ||
Anchor point | N/A | BR02G19920 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR04G09160 | 1 | ||
Capsella rubella | Orthologous gene family | 1-to-1 | CRU_007G34670 | 1 | |
Tree-based ortholog | 1-to-many | CRU_003G19270 CRU_002G19450 CRU_003G00920 | 3 | ||
Anchor point | N/A | CRU_002G15320 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_007G34670 | 1 | ||
Carica papaya | Orthologous gene family | 1-to-1 | CP00014G00010 | 1 | |
Tree-based ortholog | 1-to-many | CP00176G00020 CP00003G05010 CP00014G00890 | 3 | ||
Anchor point | N/A | CP00128G00220 CP00014G00010 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00014G00010 | 1 | ||
Citrullus lanatus | Orthologous gene family | 1-to-1 | CL10G13120 | 1 | |
Tree-based ortholog | 1-to-many | CL09G01370 CL06G15380 | 2 | ||
Anchor point | N/A | CL10G13120 CL09G18750 CL05G25270 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL05G25270 | 1 | ||
Citrus sinensis | Orthologous gene family | 1-to-1 | CS00015G01640 | 1 | |
Tree-based ortholog | 1-to-many | CS00521G00040 CS00090G00130 CS00015G01790 | 3 | ||
Anchor point | N/A | CS00003G04280 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00015G01640 | 1 | ||
Cucumis melo | Orthologous gene family | 1-to-1 | CM00011G08240 | 1 | |
Tree-based ortholog | 1-to-many | CM00067G00620 CM00030G02370 | 2 | ||
Anchor point | N/A | CM00016G04180 CM00011G08240 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00011G08240 | 1 | ||
Eucalyptus grandis | Orthologous gene family | 1-to-1 | EG0009G16290 | 1 | |
Tree-based ortholog | 1-to-many | EG0010G27250 EG0002G06250 EG0009G16320 | 3 | ||
Anchor point | N/A | EG0002G28550 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0009G16290 | 1 | ||
Fragaria vesca | Orthologous gene family | 1-to-1 | FV6G44580 | 1 | |
Tree-based ortholog | 1-to-many | FV0G18010 FV5G36050 | 2 | ||
Anchor point | N/A | FV0G05560 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV6G44580 | 1 | ||
Glycine max | Orthologous gene family | 1-to-many | GM09G37350 GM18G49350 GM19G02591 | 3 | |
Tree-based ortholog | 1-to-many | GM08G24050 GM07G00400 GM08G04600 ... | 6 | ||
Anchor point | N/A | GM01G05820 GM19G02591 GM18G49350 ... | 5 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM18G49350 GM09G37350 | 2 | ||
Gossypium raimondii | Orthologous gene family | 1-to-many | GR06G01750 GR12G05460 | 2 | |
Tree-based ortholog | 1-to-many | GR11G00230 GR04G11360 GR06G19460 ... | 4 | ||
Anchor point | N/A | GR13G08540 GR12G05460 GR06G01750 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR12G05460 | 1 | ||
Lotus japonicus | Tree-based ortholog | 1-to-many | LJ3G029470 LJ4G049610 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ4G049610 | 1 | ||
Malus domestica | Orthologous gene family | 1-to-1 | MD01G018160 | 1 | |
Tree-based ortholog | 1-to-1 | MD00G344090 | 1 | ||
Anchor point | N/A | MD16G003860 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD00G335680 MD16G003860 | 2 | ||
Manihot esculenta | Orthologous gene family | 1-to-many | ME11341G00690 ME11581G01470 | 2 | |
Tree-based ortholog | 1-to-many | ME02477G00390 ME09958G00030 ME06446G00100 ... | 4 | ||
Anchor point | N/A | ME11341G00690 ME03834G00060 ME11495G00280 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ME11341G00690 ME11581G01470 | 2 | ||
Medicago truncatula | Orthologous gene family | 1-to-1 | MT7G010160 | 1 | |
Tree-based ortholog | 1-to-many | MT4G005350 MT8G104270 MT6G084440 | 3 | ||
Anchor point | N/A | MT5G040600 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT7G010160 | 1 | ||
Oryza sativa ssp. japonica | Orthologous gene family | 1-to-1 | OS09G24700 | 1 | |
Tree-based ortholog | 1-to-1 | OS09G24700 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS09G24700 | 1 | ||
Populus trichocarpa | Orthologous gene family | 1-to-many | PT04G12680 PT10G01590 PT17G08230 | 3 | |
Tree-based ortholog | 1-to-many | PT08G00440 PT12G05640 PT15G04690 ... | 4 | ||
Anchor point | N/A | PT17G08230 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT10G01590 PT17G08230 PT04G12680 | 3 | ||
Prunus persica | Orthologous gene family | 1-to-1 | PPE_003G24700 | 1 | |
Tree-based ortholog | 1-to-many | PPE_003G01050 PPE_005G22400 | 2 | ||
Anchor point | N/A | PPE_001G28590 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_003G24700 | 1 | ||
Ricinus communis | Orthologous gene family | 1-to-1 | RC28129G00020 | 1 | |
Tree-based ortholog | 1-to-many | RC30169G00310 RC29974G00050 RC28838G00130 | 3 | ||
Anchor point | N/A | RC29813G00350 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC28129G00020 | 1 | ||
Solanum lycopersicum | Orthologous gene family | 1-to-many | SL02G067350 SL02G087950 | 2 | |
Tree-based ortholog | 1-to-many | SL06G063340 SL03G119470 SL12G036500 ... | 4 | ||
Anchor point | N/A | SL05G007570 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL02G067350 | 1 | ||
Solanum tuberosum | Orthologous gene family | 1-to-many | ST02G013210 ST02G034910 | 2 | |
Tree-based ortholog | 1-to-many | ST06G022550 ST03G033010 ST12G018300 | 3 | ||
Anchor point | N/A | ST05G010310 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST02G034910 | 1 | ||
Thellungiella parvula | Tree-based ortholog | 1-to-many | TP3G18280 TP5G29050 TP3G00940 | 3 | |
Anchor point | N/A | TP5G24730 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP5G24730 | 1 | ||
Theobroma cacao | Orthologous gene family | 1-to-1 | TC0004G08490 | 1 | |
Tree-based ortholog | 1-to-many | TC0006G05580 TC0003G03400 TC0004G08720 | 3 | ||
Anchor point | N/A | TC0002G34490 TC0004G08490 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0004G08490 | 1 | ||
Vitis vinifera | Orthologous gene family | 1-to-1 | VV14G02220 | 1 | |
Tree-based ortholog | 1-to-many | VV09G09660 VV17G06000 VV14G02310 | 3 | ||
Anchor point | N/A | VV01G12090 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV14G02220 | 1 | ||
Zea mays | Orthologous gene family | 1-to-many | ZM02G30680 ZM07G13930 ZM09G09970 | 3 | |
Tree-based ortholog | 1-to-many | ZM09G09970 ZM07G13930 ZM02G30680 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ZM07G13930 ZM09G09970 ZM02G30680 | 3 |