Integrative Orthology Viewer: ATR_00010G04390 (Amborella trichopoda)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | ATR_00010G04390 ATR_00010G04420 | 2 | |
Tree-based ortholog | ATR_00010G04390 ATR_00010G04420 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | ATR_00010G04420 ATR_00010G04390 | 2 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Arabidopsis lyrata | Tree-based ortholog | many-to-many | AL5G08340 AL1G26650 AL2G17870 | 3 | |
Anchor point | N/A | AL2G17870 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AL1G26650 | 1 | ||
Arabidopsis thaliana | Tree-based ortholog | many-to-many | AT3G28900 AT1G26880 AT1G69620 | 3 | |
Anchor point | N/A | AT1G69620 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT1G26880 | 1 | ||
Beta vulgaris | Tree-based ortholog | many-to-many | BV6G02730 BV0G54230 BV5G00960 | 3 | |
Anchor point | N/A | BV0G54230 BV6G02730 BV5G00960 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | BV0G54230 BV6G02730 BV5G00960 | 3 | ||
Brassica rapa | Tree-based ortholog | many-to-1 | BR02G31930 | 1 | |
Anchor point | N/A | BR02G19930 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BR08G23450 | 1 | ||
Capsella rubella | Tree-based ortholog | many-to-many | CRU_005G06850 CRU_001G23190 CRU_002G15330 | 3 | |
Anchor point | N/A | CRU_002G15330 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CRU_001G23190 | 1 | ||
Carica papaya | Orthologous gene family | many-to-many | CP00017G02130 CP00128G00210 | 2 | |
Tree-based ortholog | many-to-many | CP00017G02130 CP00128G00210 | 2 | ||
Anchor point | N/A | CP00128G00210 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00128G00210 | 1 | ||
Chlamydomonas reinhardtii | Tree-based ortholog | many-to-1 | CR16G04180 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CR16G04180 | 1 | ||
Citrullus lanatus | Tree-based ortholog | many-to-many | CL06G16800 CL09G18110 CL09G18740 | 3 | |
Anchor point | N/A | CL09G18740 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CL09G18740 | 1 | ||
Citrus sinensis | Orthologous gene family | many-to-many | CS00003G04270 CS00009G00670 | 2 | |
Tree-based ortholog | many-to-many | CS00009G00670 CS00003G04270 | 2 | ||
Anchor point | N/A | CS00009G00670 CS00003G04270 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CS00009G00670 | 1 | ||
Cucumis melo | Tree-based ortholog | many-to-many | CM00030G01090 CM00030G00910 CM00059G00140 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | CM00030G00910 CM00059G00140 CM00030G01090 | 3 | ||
Eucalyptus grandis | Orthologous gene family | many-to-many | EG0002G28460 EG0002G28540 EG0007G19380 | 3 | |
Tree-based ortholog | many-to-many | EG0002G28540 EG0002G28460 EG0007G19380 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | EG0002G28540 EG0002G28460 EG0007G19380 | 3 | ||
Fragaria vesca | Orthologous gene family | many-to-1 | FV5G13350 | 1 | |
Tree-based ortholog | many-to-many | FV0G05570 FV5G13350 FV6G44670 | 3 | ||
Anchor point | N/A | FV0G05570 FV5G13350 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | FV5G13350 | 1 | ||
Glycine max | Orthologous gene family | many-to-many | GM09G37360 GM18G49340 | 2 | |
Tree-based ortholog | many-to-1 | GM12G16965 | 1 | ||
Anchor point | N/A | GM18G49340 GM08G41280 GM01G05740 ... | 5 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | GM18G49340 GM09G37360 GM01G05740 ... | 4 | ||
Gossypium raimondii | Orthologous gene family | many-to-many | GR06G01760 GR12G05470 | 2 | |
Tree-based ortholog | many-to-many | GR08G19280 GR08G18120 GR06G01760 ... | 5 | ||
Anchor point | N/A | GR06G01760 GR08G19280 GR12G05470 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | GR12G05470 | 1 | ||
Lotus japonicus | Orthologous gene family | many-to-1 | LJ2G021830 | 1 | |
Tree-based ortholog | many-to-1 | LJ2G021830 | 1 | ||
Anchor point | N/A | LJ2G021830 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | LJ2G021830 | 1 | ||
Malus domestica | Orthologous gene family | many-to-many | MD13G004740 MD14G019090 | 2 | |
Tree-based ortholog | many-to-1 | MD17G003990 | 1 | ||
Anchor point | N/A | MD14G019090 MD13G004740 MD16G003870 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MD14G019090 | 1 | ||
Manihot esculenta | Orthologous gene family | many-to-many | ME03834G00070 ME11581G01460 | 2 | |
Tree-based ortholog | many-to-many | ME03834G00070 ME11581G01460 ME11495G00290 ... | 5 | ||
Anchor point | N/A | ME11341G00680 ME11581G01460 ME12794G02120 ... | 5 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | ME11341G00680 ME11581G01460 ME03834G00070 ... | 4 | ||
Medicago truncatula | Tree-based ortholog | many-to-many | MT8G467460 MT5G040570 MT7G010150 ... | 4 | |
Anchor point | N/A | MT5G040570 MT8G467460 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | MT7G010150 MT8G467460 | 2 | ||
Oryza sativa ssp. japonica | Tree-based ortholog | many-to-many | OS09G24690 OS08G33920 OS08G06040 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | OS08G06040 OS09G24690 OS08G33920 | 3 | ||
Ostreococcus lucimarinus | Tree-based ortholog | many-to-1 | OL04G04080 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OL04G04080 | 1 | ||
Physcomitrella patens | Tree-based ortholog | many-to-many | PP00200G00090 PP00039G01540 PP00076G00160 ... | 7 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | PP00200G00090 PP00002G01400 PP00039G01540 ... | 6 | ||
Populus trichocarpa | Orthologous gene family | many-to-many | PT12G10840 PT15G10650 PT17G08220 | 3 | |
Tree-based ortholog | many-to-many | PT15G10650 PT04G02940 PT00G13350 ... | 5 | ||
Anchor point | N/A | PT17G08220 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | PT17G08220 PT15G10650 | 2 | ||
Prunus persica | Orthologous gene family | many-to-1 | PPE_005G19770 | 1 | |
Tree-based ortholog | many-to-many | PPE_001G28580 PPE_005G19770 PPE_003G24710 | 3 | ||
Anchor point | N/A | PPE_005G19770 PPE_001G28580 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PPE_005G19770 | 1 | ||
Ricinus communis | Orthologous gene family | many-to-1 | RC29813G00330 | 1 | |
Tree-based ortholog | many-to-many | RC28129G00010 RC29813G00330 | 2 | ||
Anchor point | N/A | RC29813G00330 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | RC28129G00010 RC29813G00330 | 2 | ||
Solanum lycopersicum | Orthologous gene family | many-to-1 | SL06G069860 | 1 | |
Tree-based ortholog | many-to-many | SL06G069860 SL05G007560 SL02G087930 | 3 | ||
Anchor point | N/A | SL05G007560 SL06G069860 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SL06G069860 | 1 | ||
Solanum tuberosum | Orthologous gene family | many-to-1 | ST06G026850 | 1 | |
Tree-based ortholog | many-to-1 | ST01G036110 | 1 | ||
Anchor point | N/A | ST05G010320 ST06G026850 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ST06G026850 | 1 | ||
Thellungiella parvula | Orthologous gene family | many-to-1 | TP5G24740 | 1 | |
Tree-based ortholog | many-to-many | TP2G17520 TP1G21890 TP5G24740 | 3 | ||
Anchor point | N/A | TP5G24740 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TP5G24740 | 1 | ||
Theobroma cacao | Orthologous gene family | many-to-many | TC0002G34500 TC0003G08890 | 2 | |
Tree-based ortholog | many-to-many | TC0002G34500 TC0004G08480 TC0003G08890 | 3 | ||
Anchor point | N/A | TC0002G34500 TC0004G08480 TC0003G08890 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | TC0002G34500 TC0003G08890 | 2 | ||
Vitis vinifera | Orthologous gene family | many-to-many | VV01G12100 VV14G02230 | 2 | |
Tree-based ortholog | many-to-many | VV14G02230 VV01G12100 | 2 | ||
Anchor point | N/A | VV01G12100 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | VV14G02230 VV01G12100 | 2 | ||
Zea mays | Tree-based ortholog | many-to-many | ZM04G07580 ZM10G10320 ZM07G13920 ... | 5 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZM01G38140 | 1 |