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Integrative Orthology Viewer:
ATR_00009G03590
(Amborella trichopoda)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | ATR_00009G03590 | 1 |  |
| Tree-based ortholog | ATR_00041G01080 ATR_00009G03590 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | ATR_00009G03590 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Arabidopsis lyrata | Tree-based ortholog | many-to-1 | AL7G17920 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL7G17920 | 1 | ||
| Arabidopsis thaliana | Orthologous gene family | 1-to-many | AT4G27780 AT5G53470 | 2 | |
| Tree-based ortholog | many-to-1 | AT4G24230 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT4G27780 | 1 | ||
| Beta vulgaris | Orthologous gene family | 1-to-1 | BV3G01680 | 1 | |
| Tree-based ortholog | many-to-1 | BV1G14340 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV3G01680 | 1 | ||
| Brassica rapa | Orthologous gene family | 1-to-many | BR01G18110 BR02G15760 | 2 | |
| Tree-based ortholog | many-to-many | BR03G47780 BR01G14220 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR01G18110 | 1 | ||
| Capsella rubella | Orthologous gene family | 1-to-many | CRU_007G12280 CRU_008G13310 | 2 | |
| Tree-based ortholog | many-to-1 | CRU_007G15940 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_007G12280 | 1 | ||
| Carica papaya | Orthologous gene family | 1-to-1 | CP00003G01110 | 1 | |
| Tree-based ortholog | many-to-1 | CP00021G01120 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00003G01110 | 1 | ||
| Chlamydomonas reinhardtii | Orthologous gene family | 1-to-1 | CR14G04500 | 1 | |
| Tree-based ortholog | many-to-1 | CR14G04500 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR14G04500 | 1 | ||
| Citrullus lanatus | Orthologous gene family | 1-to-many | CL01G00230 CL01G00240 | 2 | |
| Tree-based ortholog | many-to-many | CL01G17670 CL01G00240 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL01G00230 | 1 | ||
| Citrus sinensis | Orthologous gene family | 1-to-1 | CS00066G00040 | 1 | |
| Tree-based ortholog | many-to-many | CS00006G01260 CS00004G04330 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00066G00040 | 1 | ||
| Cucumis melo | Orthologous gene family | 1-to-1 | CM00005G08790 | 1 | |
| Tree-based ortholog | many-to-1 | CM00007G06410 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00005G08790 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | 1-to-1 | EG0011G03530 | 1 | |
| Tree-based ortholog | many-to-many | EG0009G05770 EG0006G01010 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0011G03530 | 1 | ||
| Fragaria vesca | Tree-based ortholog | many-to-1 | FV1G24850 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV7G35890 | 1 | ||
| Glycine max | Orthologous gene family | 1-to-many | GM04G41220 GM06G13630 | 2 | |
| Tree-based ortholog | many-to-many | GM01G39920 GM11G05360 GM14G09680 ... | 4 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM06G13630 GM04G41220 | 2 | ||
| Gossypium raimondii | Orthologous gene family | 1-to-1 | GR06G20220 | 1 | |
| Tree-based ortholog | many-to-many | GR07G22150 GR08G08030 GR10G02470 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR06G20220 | 1 | ||
| Lotus japonicus | Orthologous gene family | 1-to-many | LJ1G014160 LJ1G014280 | 2 | |
| Tree-based ortholog | many-to-1 | LJ5G003890 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ1G014160 | 1 | ||
| Malus domestica | Orthologous gene family | 1-to-many | MD01G022250 MD07G020210 | 2 | |
| Tree-based ortholog | many-to-many | MD07G020210 MD01G022250 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD07G020210 MD01G022250 | 2 | ||
| Manihot esculenta | Orthologous gene family | 1-to-1 | ME04587G00070 | 1 | |
| Tree-based ortholog | many-to-many | ME06582G01170 ME03363G00100 ME03237G00410 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME04587G00070 | 1 | ||
| Medicago truncatula | Orthologous gene family | 1-to-1 | MT3G491870 | 1 | |
| Tree-based ortholog | many-to-1 | MT1G418545 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT3G491870 | 1 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | 1-to-1 | OS04G58550 | 1 | |
| Tree-based ortholog | many-to-1 | OS03G14000 | 1 | ||
| Anchor point | N/A | OS04G58490 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS04G58550 | 1 | ||
| Ostreococcus lucimarinus | Orthologous gene family | 1-to-1 | OL13G01290 | 1 | |
| Tree-based ortholog | many-to-1 | OL13G01290 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL01G06350 | 1 | ||
| Physcomitrella patens | Orthologous gene family | 1-to-many | PP00081G00950 PP00326G00050 | 2 | |
| Tree-based ortholog | many-to-many | PP00326G00050 PP00081G00950 PP00022G02120 ... | 4 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00326G00050 PP00081G00950 | 2 | ||
| Populus trichocarpa | Orthologous gene family | 1-to-many | PT12G01770 PT15G01020 | 2 | |
| Tree-based ortholog | many-to-many | PT14G01870 PT02G12020 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT15G01020 | 1 | ||
| Prunus persica | Orthologous gene family | 1-to-1 | PPE_002G30060 | 1 | |
| Tree-based ortholog | many-to-1 | PPE_006G23300 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_002G30060 | 1 | ||
| Ricinus communis | Orthologous gene family | 1-to-1 | RC29753G00030 | 1 | |
| Tree-based ortholog | many-to-1 | RC30170G01250 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29753G00030 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | 1-to-1 | SL03G082910 | 1 | |
| Tree-based ortholog | many-to-1 | SL04G078090 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL03G082910 | 1 | ||
| Solanum tuberosum | Orthologous gene family | 1-to-1 | ST03G012980 | 1 | |
| Tree-based ortholog | many-to-1 | ST04G031080 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST03G012980 | 1 | ||
| Thellungiella parvula | Orthologous gene family | 1-to-many | TP6G15600 TP7G25740 | 2 | |
| Tree-based ortholog | many-to-1 | TP7G22210 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP7G25740 | 1 | ||
| Theobroma cacao | Orthologous gene family | 1-to-1 | TC0003G20220 | 1 | |
| Tree-based ortholog | many-to-many | TC0001G06600 TC0008G08820 | 2 | ||
| Anchor point | N/A | TC0003G20220 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0003G20220 | 1 | ||
| Vitis vinifera | Orthologous gene family | 1-to-1 | VV16G09280 | 1 | |
| Tree-based ortholog | many-to-many | VV07G00420 VV18G06180 | 2 | ||
| Anchor point | N/A | VV16G09280 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV16G09280 | 1 | ||
| Zea mays | Orthologous gene family | 1-to-1 | ZM02G00220 | 1 | |
| Tree-based ortholog | many-to-1 | ZM01G09480 | 1 | ||
| Anchor point | N/A | ZM02G00220 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM02G00220 | 1 |