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Integrative Orthology Viewer:
ATR_00004G00850
(Amborella trichopoda)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | ATR_00004G00850 | 1 |  |
| Tree-based ortholog | ATR_00004G00850 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | ATR_00004G00850 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Arabidopsis lyrata | Orthologous gene family | 1-to-many | AL3G03200 AL5G11190 AL6G21290 | 3 | |
| Tree-based ortholog | 1-to-1 | AL3G03200 | 1 | ||
| Anchor point | N/A | AL6G21290 AL3G03200 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL3G03200 | 1 | ||
| Arabidopsis thaliana | Orthologous gene family | 1-to-many | AT3G03740 AT3G43700 | 2 | |
| Tree-based ortholog | 1-to-1 | AT3G03740 | 1 | ||
| Anchor point | N/A | AT3G03740 AT5G21010 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT3G03740 | 1 | ||
| Beta vulgaris | Orthologous gene family | 1-to-1 | BV7G04520 | 1 | |
| Tree-based ortholog | 1-to-1 | BV7G04520 | 1 | ||
| Anchor point | N/A | BV7G04520 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV7G04520 | 1 | ||
| Brassica rapa | Orthologous gene family | 1-to-many | BR02G10550 BR03G09270 BR07G00670 | 3 | |
| Tree-based ortholog | 1-to-1 | BR07G00670 | 1 | ||
| Anchor point | N/A | BR03G09270 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR07G00670 | 1 | ||
| Capsella rubella | Orthologous gene family | 1-to-many | CRU_003G02760 CRU_005G08730 CRU_005G08860 ... | 4 | |
| Tree-based ortholog | 1-to-1 | CRU_003G02760 | 1 | ||
| Anchor point | N/A | CRU_003G02760 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_003G02760 | 1 | ||
| Carica papaya | Orthologous gene family | 1-to-1 | CP00161G00270 | 1 | |
| Tree-based ortholog | 1-to-1 | CP00161G00270 | 1 | ||
| Anchor point | N/A | CP00161G00270 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00161G00270 | 1 | ||
| Chlamydomonas reinhardtii | Tree-based ortholog | 1-to-many | CR03G00300 CR01G02160 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR03G00300 | 1 | ||
| Citrullus lanatus | Orthologous gene family | 1-to-1 | CL03G14080 | 1 | |
| Tree-based ortholog | 1-to-1 | CL04G04750 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL03G14080 | 1 | ||
| Citrus sinensis | Orthologous gene family | 1-to-1 | CS00296G00090 | 1 | |
| Tree-based ortholog | 1-to-1 | CS00029G01310 | 1 | ||
| Anchor point | N/A | CS00029G01310 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00296G00090 | 1 | ||
| Cucumis melo | Orthologous gene family | 1-to-1 | CM00010G00700 | 1 | |
| Tree-based ortholog | 1-to-1 | CM00010G00700 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00010G00700 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | 1-to-many | EG0010G05390 EG0011G12700 | 2 | |
| Tree-based ortholog | 1-to-1 | EG0011G12700 | 1 | ||
| Anchor point | N/A | EG0011G12700 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0011G12700 | 1 | ||
| Fragaria vesca | Orthologous gene family | 1-to-1 | FV1G22740 | 1 | |
| Tree-based ortholog | 1-to-1 | FV1G22740 | 1 | ||
| Anchor point | N/A | FV1G22740 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV1G22740 | 1 | ||
| Glycine max | Orthologous gene family | 1-to-many | GM16G04080 GM19G09450 GM19G09600 ... | 8 | |
| Tree-based ortholog | 1-to-many | GM19G09700 GM19G09650 GM19G09450 ... | 13 | ||
| Anchor point | N/A | GM19G29420 GM16G04060 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM02G44046 GM14G05000 | 2 | ||
| Gossypium raimondii | Orthologous gene family | 1-to-1 | GR07G25590 | 1 | |
| Tree-based ortholog | 1-to-1 | GR07G25590 | 1 | ||
| Anchor point | N/A | GR07G25590 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR13G25630 | 1 | ||
| Lotus japonicus | Tree-based ortholog | 1-to-1 | LJ1G055090 | 1 | |
| Anchor point | N/A | LJ1G055090 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ1G055090 | 1 | ||
| Malus domestica | Orthologous gene family | 1-to-many | MD12G001040 MD14G000520 | 2 | |
| Tree-based ortholog | 1-to-many | MD12G001040 MD14G000520 | 2 | ||
| Anchor point | N/A | MD14G000520 MD12G001040 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD14G000520 MD12G001040 | 2 | ||
| Manihot esculenta | Tree-based ortholog | 1-to-1 | ME02431G00200 | 1 | |
| Anchor point | N/A | ME02431G00200 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME02431G00200 | 1 | ||
| Medicago truncatula | Tree-based ortholog | 1-to-1 | MT7G086500 | 1 | |
| Anchor point | N/A | MT7G086500 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT5G087500 | 1 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | 1-to-many | OS03G57854 OS07G07270 | 2 | |
| Tree-based ortholog | 1-to-many | OS03G57854 OS07G07270 | 2 | ||
| Anchor point | N/A | OS07G07270 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS03G57854 | 1 | ||
| Ostreococcus lucimarinus | Tree-based ortholog | 1-to-1 | OL20G03270 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL20G03270 | 1 | ||
| Physcomitrella patens | Tree-based ortholog | 1-to-many | PP00148G00360 PP00349G00010 PP00205G00130 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00205G00130 PP00349G00010 PP00148G00360 | 3 | ||
| Populus trichocarpa | Orthologous gene family | 1-to-many | PT09G15650 PT19G03950 | 2 | |
| Tree-based ortholog | 1-to-1 | PT19G03950 | 1 | ||
| Anchor point | N/A | PT19G03950 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT04G19420 | 1 | ||
| Prunus persica | Orthologous gene family | 1-to-1 | PPE_007G02060 | 1 | |
| Tree-based ortholog | 1-to-1 | PPE_007G02060 | 1 | ||
| Anchor point | N/A | PPE_007G02060 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_007G02060 | 1 | ||
| Ricinus communis | Orthologous gene family | 1-to-1 | RC29665G00020 | 1 | |
| Tree-based ortholog | 1-to-1 | RC30072G00220 | 1 | ||
| Anchor point | N/A | RC30072G00220 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29665G00020 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | 1-to-1 | SL01G009060 | 1 | |
| Tree-based ortholog | 1-to-many | SL11G072070 SL01G009060 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL01G009060 | 1 | ||
| Solanum tuberosum | Tree-based ortholog | 1-to-many | ST11G028730 ST01G009880 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST01G009880 | 1 | ||
| Thellungiella parvula | Orthologous gene family | 1-to-many | TP3G02710 TP6G23520 | 2 | |
| Tree-based ortholog | 1-to-1 | TP3G02710 | 1 | ||
| Anchor point | N/A | TP3G02710 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP3G02710 | 1 | ||
| Theobroma cacao | Orthologous gene family | 1-to-1 | TC0005G24320 | 1 | |
| Tree-based ortholog | 1-to-1 | TC0005G24320 | 1 | ||
| Anchor point | N/A | TC0005G24320 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0009G26000 | 1 | ||
| Vitis vinifera | Orthologous gene family | 1-to-many | VV06G12430 VV08G05610 | 2 | |
| Tree-based ortholog | 1-to-1 | VV08G05610 | 1 | ||
| Anchor point | N/A | VV08G05610 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV06G12430 | 1 | ||
| Zea mays | Orthologous gene family | 1-to-many | ZM01G55680 ZM05G02810 ZM07G02530 | 3 | |
| Tree-based ortholog | 1-to-many | ZM01G55680 ZM05G02810 ZM07G02530 | 3 | ||
| Anchor point | N/A | ZM05G02810 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ZM05G02810 ZM01G55680 | 2 |