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Integrative Orthology Viewer:
ATR_00002G04540
(Amborella trichopoda)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | ATR_00002G04540 ATR_00146G00070 | 2 |  |
| Tree-based ortholog | ATR_00002G04540 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | ATR_00002G04540 ATR_00146G00070 | 2 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Arabidopsis lyrata | Orthologous gene family | many-to-1 | AL1G08450 | 1 | |
| Tree-based ortholog | 1-to-many | AL1G08450 AL4G15330 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AL1G08450 | 1 | ||
| Arabidopsis thaliana | Orthologous gene family | many-to-1 | AT1G08800 | 1 | |
| Tree-based ortholog | 1-to-many | AT1G08800 AT2G30690 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT1G08800 | 1 | ||
| Beta vulgaris | Orthologous gene family | many-to-1 | BV4G00070 | 1 | |
| Tree-based ortholog | 1-to-many | BV4G00070 BV5G13230 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BV4G00070 | 1 | ||
| Brassica rapa | Orthologous gene family | many-to-many | BR06G05480 BR08G29630 | 2 | |
| Tree-based ortholog | 1-to-many | BR06G05480 BR08G29630 BR05G13110 ... | 4 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BR06G05480 | 1 | ||
| Capsella rubella | Orthologous gene family | many-to-1 | CRU_001G07740 | 1 | |
| Tree-based ortholog | 1-to-many | CRU_001G07740 CRU_004G11540 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CRU_001G07740 | 1 | ||
| Carica papaya | Orthologous gene family | many-to-1 | CP00162G00030 | 1 | |
| Tree-based ortholog | 1-to-many | CP00162G00030 CP36424G00010 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00162G00030 | 1 | ||
| Citrullus lanatus | Orthologous gene family | many-to-1 | CL02G17080 | 1 | |
| Tree-based ortholog | 1-to-many | CL02G17080 CL07G02300 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CL02G17080 | 1 | ||
| Citrus sinensis | Orthologous gene family | many-to-1 | CS00742G00040 | 1 | |
| Tree-based ortholog | 1-to-many | CS00742G00040 CS00022G00270 | 2 | ||
| Anchor point | N/A | CS00022G00270 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CS00022G00270 | 1 | ||
| Cucumis melo | Orthologous gene family | many-to-1 | CM00003G05290 | 1 | |
| Tree-based ortholog | 1-to-many | CM00003G05290 CM00022G02190 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CM00003G05290 | 1 | ||
| Eucalyptus grandis | Tree-based ortholog | 1-to-1 | EG0002G16740 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | EG0002G16740 | 1 | ||
| Fragaria vesca | Orthologous gene family | many-to-1 | FV0G25880 | 1 | |
| Tree-based ortholog | 1-to-many | FV0G25880 FV2G08360 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | FV0G25880 | 1 | ||
| Glycine max | Orthologous gene family | many-to-many | GM03G40900 GM19G43561 | 2 | |
| Tree-based ortholog | 1-to-many | GM03G40900 GM19G43561 GM10G03941 ... | 5 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | GM03G40900 GM19G43561 | 2 | ||
| Gossypium raimondii | Orthologous gene family | many-to-1 | GR07G27910 | 1 | |
| Tree-based ortholog | 1-to-many | GR07G27910 GR04G05690 GR13G10410 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | GR07G27910 | 1 | ||
| Lotus japonicus | Orthologous gene family | many-to-many | LJ1G073110 LJ1G073170 | 2 | |
| Tree-based ortholog | 1-to-1 | LJ1G073170 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | LJ1G073170 | 1 | ||
| Malus domestica | Orthologous gene family | many-to-1 | MD04G018530 | 1 | |
| Tree-based ortholog | 1-to-many | MD04G018530 MD05G013340 MD10G015260 ... | 4 | ||
| Anchor point | N/A | MD04G018530 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MD04G018530 | 1 | ||
| Manihot esculenta | Orthologous gene family | many-to-many | ME03614G03170 ME03802G00440 | 2 | |
| Tree-based ortholog | 1-to-many | ME03614G03170 ME03802G00440 ME02906G00230 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | ME03614G03170 ME03802G00440 | 2 | ||
| Medicago truncatula | Orthologous gene family | many-to-1 | MT7G115350 | 1 | |
| Tree-based ortholog | 1-to-many | MT7G115350 MT1G070350 | 2 | ||
| Anchor point | N/A | MT1G070350 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MT7G115350 | 1 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | many-to-1 | OS01G56790 | 1 | |
| Tree-based ortholog | 1-to-many | OS10G27480 OS03G06890 OS01G56790 ... | 4 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS01G56790 | 1 | ||
| Physcomitrella patens | Tree-based ortholog | 1-to-many | PP00088G00960 PP00081G00550 PP00036G00550 ... | 5 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | PP00030G00900 PP00145G00530 PP00036G00550 ... | 6 | ||
| Populus trichocarpa | Orthologous gene family | many-to-many | PT13G04340 PT19G01220 | 2 | |
| Tree-based ortholog | 1-to-many | PT13G04340 PT19G01220 PT02G04250 ... | 4 | ||
| Anchor point | N/A | PT05G22060 PT02G04250 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | PT13G04340 PT19G01220 | 2 | ||
| Prunus persica | Tree-based ortholog | 1-to-many | PPE_006G35060 PPE_008G24380 | 2 | |
| Anchor point | N/A | PPE_008G24380 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PPE_006G35060 | 1 | ||
| Ricinus communis | Orthologous gene family | many-to-1 | RC29680G00040 | 1 | |
| Tree-based ortholog | 1-to-many | RC29680G00040 RC29883G00700 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | RC29680G00040 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | many-to-1 | SL01G097040 | 1 | |
| Tree-based ortholog | 1-to-many | SL01G097040 SL09G066140 | 2 | ||
| Anchor point | N/A | SL01G097040 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SL01G097040 | 1 | ||
| Solanum tuberosum | Orthologous gene family | many-to-1 | ST01G034550 | 1 | |
| Tree-based ortholog | 1-to-many | ST01G034550 ST09G019200 | 2 | ||
| Anchor point | N/A | ST01G034550 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ST01G034550 | 1 | ||
| Thellungiella parvula | Orthologous gene family | many-to-many | TP1G07440 TP4G13200 | 2 | |
| Tree-based ortholog | 1-to-many | TP1G07440 TP4G13200 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TP1G07440 | 1 | ||
| Theobroma cacao | Orthologous gene family | many-to-1 | TC0005G27640 | 1 | |
| Tree-based ortholog | 1-to-many | TC0005G27640 TC0001G26270 | 2 | ||
| Anchor point | N/A | TC0001G26270 TC0005G27640 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TC0005G27640 | 1 | ||
| Vitis vinifera | Orthologous gene family | many-to-1 | VV14G15010 | 1 | |
| Tree-based ortholog | 1-to-many | VV14G15010 VV07G01820 | 2 | ||
| Anchor point | N/A | VV14G15010 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV14G15010 | 1 | ||
| Zea mays | Orthologous gene family | many-to-many | ZM03G30390 ZM09G28830 | 2 | |
| Tree-based ortholog | 1-to-many | ZM01G44400 ZM05G11200 ZM09G28830 ... | 4 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZM03G30390 | 1 |