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Integrative Orthology Viewer:
ATR_00002G02300
(Amborella trichopoda)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | ATR_00002G02300 | 1 |  |
| Tree-based ortholog | ATR_00002G02300 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | ATR_00002G02300 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Arabidopsis lyrata | Orthologous gene family | 1-to-1 | AL3G02120 | 1 | |
| Tree-based ortholog | 1-to-many | AL8G01460 AL3G02120 | 2 | ||
| Anchor point | N/A | AL8G01460 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL3G02120 | 1 | ||
| Arabidopsis thaliana | Orthologous gene family | 1-to-1 | AT3G02910 | 1 | |
| Tree-based ortholog | 1-to-many | AT5G46720 AT3G02910 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT3G02910 | 1 | ||
| Beta vulgaris | Orthologous gene family | 1-to-1 | BV3G09900 | 1 | |
| Tree-based ortholog | 1-to-many | BV0G62560 BV3G09900 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV3G09900 | 1 | ||
| Brassica rapa | Orthologous gene family | 1-to-many | BR01G35720 BR05G35340 | 2 | |
| Tree-based ortholog | 1-to-many | BR09G22700 BR01G35720 BR05G35340 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR05G35340 | 1 | ||
| Capsella rubella | Orthologous gene family | 1-to-1 | CRU_003G01940 | 1 | |
| Tree-based ortholog | 1-to-many | CRU_008G01190 CRU_003G01940 | 2 | ||
| Anchor point | N/A | CRU_008G01190 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_003G01940 | 1 | ||
| Carica papaya | Orthologous gene family | 1-to-1 | CP00043G00940 | 1 | |
| Tree-based ortholog | 1-to-1 | CP00043G00940 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00043G00940 | 1 | ||
| Citrullus lanatus | Orthologous gene family | 1-to-1 | CL09G17830 | 1 | |
| Tree-based ortholog | 1-to-1 | CL09G17830 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL09G17830 | 1 | ||
| Citrus sinensis | Orthologous gene family | 1-to-1 | CS00246G00040 | 1 | |
| Tree-based ortholog | 1-to-many | CS00325G00090 CS00246G00040 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00246G00040 | 1 | ||
| Cucumis melo | Orthologous gene family | 1-to-1 | CM00050G00390 | 1 | |
| Tree-based ortholog | 1-to-many | CM01596G01300 CM00050G00390 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00050G00390 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | 1-to-1 | EG0001G25520 | 1 | |
| Tree-based ortholog | 1-to-many | EG0004G18110 EG0001G25520 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0004G18110 | 1 | ||
| Fragaria vesca | Tree-based ortholog | 1-to-1 | FV5G29490 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV5G29490 | 1 | ||
| Glycine max | Orthologous gene family | 1-to-many | GM11G11700 GM12G01820 | 2 | |
| Tree-based ortholog | 1-to-many | GM01G02200 GM11G11700 GM12G01820 | 3 | ||
| Anchor point | N/A | GM01G02200 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM11G11700 GM12G01820 | 2 | ||
| Gossypium raimondii | Orthologous gene family | 1-to-many | GR03G05680 GR04G25610 | 2 | |
| Tree-based ortholog | 1-to-many | GR03G18290 GR04G18470 GR03G05680 ... | 4 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR03G05680 | 1 | ||
| Lotus japonicus | Orthologous gene family | 1-to-1 | LJ3G050120 | 1 | |
| Tree-based ortholog | 1-to-1 | LJ3G050120 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ3G050120 | 1 | ||
| Malus domestica | Orthologous gene family | 1-to-1 | MD07G021480 | 1 | |
| Tree-based ortholog | 1-to-many | MD00G505690 MD07G021480 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD07G021480 | 1 | ||
| Manihot esculenta | Orthologous gene family | 1-to-1 | ME03614G01170 | 1 | |
| Tree-based ortholog | 1-to-1 | ME03614G01170 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME03614G01170 | 1 | ||
| Medicago truncatula | Tree-based ortholog | 1-to-many | MT5G030280 MT5G430420 | 2 | |
| Anchor point | N/A | MT5G030280 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MT5G430420 MT5G030280 | 2 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | 1-to-1 | OS03G63700 | 1 | |
| Tree-based ortholog | 1-to-1 | OS03G63700 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS03G63700 | 1 | ||
| Ostreococcus lucimarinus | Tree-based ortholog | 1-to-1 | OL05G03490 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL05G03490 | 1 | ||
| Physcomitrella patens | Orthologous gene family | 1-to-many | PP00025G00850 PP00156G00770 PP00159G00630 ... | 5 | |
| Tree-based ortholog | 1-to-1 | PP00389G00090 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00025G00850 PP00341G00400 PP00159G00630 ... | 5 | ||
| Populus trichocarpa | Orthologous gene family | 1-to-1 | PT19G04110 | 1 | |
| Tree-based ortholog | 1-to-many | PT03G09260 PT04G13930 PT19G04110 ... | 4 | ||
| Anchor point | N/A | PT03G09260 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT19G04110 | 1 | ||
| Prunus persica | Orthologous gene family | 1-to-1 | PPE_002G31440 | 1 | |
| Tree-based ortholog | 1-to-many | PPE_005G03870 PPE_002G31440 | 2 | ||
| Anchor point | N/A | PPE_005G03870 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_002G31440 | 1 | ||
| Ricinus communis | Orthologous gene family | 1-to-1 | RC30073G01060 | 1 | |
| Tree-based ortholog | 1-to-many | RC30054G00400 RC30073G01060 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC30073G01060 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | 1-to-1 | SL03G097230 | 1 | |
| Tree-based ortholog | 1-to-many | SL04G056330 SL03G097230 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL03G097230 | 1 | ||
| Solanum tuberosum | Orthologous gene family | 1-to-1 | ST03G017920 | 1 | |
| Tree-based ortholog | 1-to-many | ST01G030880 ST03G017920 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST03G017920 | 1 | ||
| Thellungiella parvula | Orthologous gene family | 1-to-1 | TP3G01970 | 1 | |
| Tree-based ortholog | 1-to-many | TP2G11530 TP3G01970 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP3G01970 | 1 | ||
| Theobroma cacao | Orthologous gene family | 1-to-1 | TC0005G22160 | 1 | |
| Tree-based ortholog | 1-to-many | TC0003G22550 TC0005G22160 | 2 | ||
| Anchor point | N/A | TC0003G22550 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0005G22160 | 1 | ||
| Vitis vinifera | Orthologous gene family | 1-to-1 | VV16G05360 | 1 | |
| Tree-based ortholog | 1-to-1 | VV16G05360 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV16G05360 | 1 | ||
| Zea mays | Orthologous gene family | 1-to-1 | ZM01G59900 | 1 | |
| Tree-based ortholog | 1-to-1 | ZM01G59900 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM01G59900 | 1 |