Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
ATR_00001G02300
(Amborella trichopoda)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | ATR_00001G02300 | 1 |  |
| Tree-based ortholog | ATR_00001G02300 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | ATR_00001G02300 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Arabidopsis lyrata | Tree-based ortholog | 1-to-many | AL2G24460 AL1G20790 AL4G00590 ... | 5 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL2G24460 | 1 | ||
| Arabidopsis thaliana | Tree-based ortholog | 1-to-many | AT1G75520 AT1G19790 AT2G21400 ... | 6 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT1G75520 | 1 | ||
| Beta vulgaris | Tree-based ortholog | 1-to-many | BV1G08260 BV9G12890 BV6G16420 | 3 | |
| Anchor point | N/A | BV6G16420 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV6G16420 | 1 | ||
| Brassica rapa | Tree-based ortholog | 1-to-many | BR02G23220 BR07G30810 BR07G19900 ... | 8 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR07G30810 | 1 | ||
| Capsella rubella | Tree-based ortholog | 1-to-many | CRU_002G21110 CRU_001G18500 CRU_004G00460 ... | 5 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_002G21110 | 1 | ||
| Carica papaya | Tree-based ortholog | 1-to-many | CP00140G00130 CP00150G00470 CP00006G01910 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00150G00470 | 1 | ||
| Citrullus lanatus | Tree-based ortholog | 1-to-many | CL01G20160 CL05G19720 CL09G13210 ... | 5 | |
| Anchor point | N/A | CL01G20160 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL01G20160 | 1 | ||
| Citrus sinensis | Tree-based ortholog | 1-to-many | CS00002G04980 CS00017G00530 CS00237G00200 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00002G04980 | 1 | ||
| Cucumis melo | Tree-based ortholog | 1-to-many | CM00007G09120 CM01596G05020 CM00034G03110 ... | 5 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00007G09120 | 1 | ||
| Eucalyptus grandis | Tree-based ortholog | 1-to-many | EG0006G13080 EG0009G20090 EG0009G20080 ... | 5 | |
| Anchor point | N/A | EG0009G20080 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | EG0009G20090 EG0009G20080 | 2 | ||
| Fragaria vesca | Tree-based ortholog | 1-to-many | FV2G39060 FV1G14390 FV2G16770 | 3 | |
| Anchor point | N/A | FV1G14390 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV2G39060 | 1 | ||
| Glycine max | Tree-based ortholog | 1-to-many | GM04G03000 GM06G03030 GM17G37410 ... | 11 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM02G05830 GM16G24510 | 2 | ||
| Gossypium raimondii | Tree-based ortholog | 1-to-many | GR02G12560 GR09G19730 GR10G00680 ... | 8 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR02G12560 | 1 | ||
| Lotus japonicus | Tree-based ortholog | 1-to-many | LJ1G029970 LJ2G030120 LJ3G047370 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ2G030120 | 1 | ||
| Malus domestica | Tree-based ortholog | 1-to-many | MD12G015230 MD00G466750 MD02G012020 ... | 5 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD02G012020 MD15G018120 | 2 | ||
| Manihot esculenta | Tree-based ortholog | 1-to-many | ME09657G00180 ME07012G00680 ME06512G00680 ... | 5 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ME06512G00680 ME07520G02230 | 2 | ||
| Medicago truncatula | Tree-based ortholog | 1-to-many | MT1G023230 MT3G112510 MT8G076620 ... | 5 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT8G076620 | 1 | ||
| Oryza sativa ssp. japonica | Tree-based ortholog | 1-to-many | OS09G36160 OS08G43410 OS06G49830 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | OS05G32070 OS01G72490 | 2 | ||
| Physcomitrella patens | Tree-based ortholog | 1-to-many | PP00019G00590 PP00373G00040 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00373G00040 PP00019G00590 | 2 | ||
| Populus trichocarpa | Tree-based ortholog | 1-to-many | PT05G23420 PT02G02850 PT09G12160 ... | 6 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT05G11820 | 1 | ||
| Prunus persica | Tree-based ortholog | 1-to-many | PPE_001G37970 PPE_007G18440 PPE_008G10610 | 3 | |
| Anchor point | N/A | PPE_007G18440 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_001G37970 | 1 | ||
| Ricinus communis | Tree-based ortholog | 1-to-many | RC30170G04790 RC30131G02490 RC29279G00010 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC30131G02490 | 1 | ||
| Solanum lycopersicum | Tree-based ortholog | 1-to-many | SL00G117450 SL04G080970 SL02G062400 ... | 6 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL01G110140 | 1 | ||
| Solanum tuberosum | Orthologous gene family | 1-to-1 | ST07G015190 | 1 | |
| Tree-based ortholog | 1-to-many | ST03G009380 ST04G034360 ST02G010050 ... | 6 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST02G010050 | 1 | ||
| Thellungiella parvula | Tree-based ortholog | 1-to-many | TP5G30650 TP1G17600 TP2G30370 ... | 4 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP5G30650 | 1 | ||
| Theobroma cacao | Tree-based ortholog | 1-to-many | TC0008G03510 TC0002G07470 TC0001G02360 | 3 | |
| Anchor point | N/A | TC0001G02360 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0002G07470 | 1 | ||
| Vitis vinifera | Tree-based ortholog | 1-to-many | VV18G09810 VV03G06180 VV04G01250 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV04G01250 | 1 | ||
| Zea mays | Tree-based ortholog | 1-to-1 | ZM07G20300 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ZM01G37110 ZM04G34960 | 2 |