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Integrative Orthology Viewer:
ATR_00001G02200
(Amborella trichopoda)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | ATR_00001G02200 | 1 |  |
| Tree-based ortholog | ATR_00001G02200 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | ATR_00001G02200 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Arabidopsis lyrata | Orthologous gene family | 1-to-1 | AL2G24490 | 1 | |
| Tree-based ortholog | 1-to-many | AL2G24490 AL7G00980 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL7G00980 | 1 | ||
| Arabidopsis thaliana | Orthologous gene family | 1-to-1 | AT1G75540 | 1 | |
| Tree-based ortholog | 1-to-many | AT1G75540 AT4G39070 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT1G75540 | 1 | ||
| Beta vulgaris | Orthologous gene family | 1-to-1 | BV1G08190 | 1 | |
| Tree-based ortholog | 1-to-many | BV1G08190 BV9G12830 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV1G08190 | 1 | ||
| Brassica rapa | Orthologous gene family | 1-to-many | BR07G19890 BR07G30830 | 2 | |
| Tree-based ortholog | 1-to-many | BR07G30830 BR07G19890 BR02G23230 ... | 5 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | BR07G30830 BR07G19890 | 2 | ||
| Capsella rubella | Orthologous gene family | 1-to-1 | CRU_002G21130 | 1 | |
| Tree-based ortholog | 1-to-many | CRU_002G21130 CRU_007G00850 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_007G00850 | 1 | ||
| Carica papaya | Orthologous gene family | 1-to-1 | CP00140G00150 | 1 | |
| Tree-based ortholog | 1-to-many | CP00140G00150 CP00150G00430 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00140G00150 | 1 | ||
| Chlamydomonas reinhardtii | Tree-based ortholog | 1-to-many | CR06G07180 CR12G11170 CR03G09140 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR12G11170 | 1 | ||
| Citrullus lanatus | Orthologous gene family | 1-to-1 | CL08G14310 | 1 | |
| Tree-based ortholog | 1-to-many | CL08G14310 CL09G13230 CL11G14890 ... | 4 | ||
| Anchor point | N/A | CL01G20250 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL08G14310 | 1 | ||
| Citrus sinensis | Orthologous gene family | 1-to-1 | CS00002G05030 | 1 | |
| Tree-based ortholog | 1-to-many | CS00002G05030 CS00474G00090 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00474G00090 | 1 | ||
| Cucumis melo | Orthologous gene family | 1-to-1 | CM00014G03450 | 1 | |
| Tree-based ortholog | 1-to-many | CM00014G03450 CM00059G01610 CM00019G03400 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00014G03450 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | 1-to-1 | EG0006G13110 | 1 | |
| Tree-based ortholog | 1-to-many | EG0006G13110 EG0007G12520 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0007G12520 | 1 | ||
| Fragaria vesca | Tree-based ortholog | 1-to-1 | FV2G16830 | 1 | |
| Anchor point | N/A | FV1G13990 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV2G49980 | 1 | ||
| Glycine max | Orthologous gene family | 1-to-many | GM14G40650 GM17G37430 | 2 | |
| Tree-based ortholog | 1-to-many | GM06G02970 GM04G02960 GM14G40650 ... | 8 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM14G40650 GM17G37430 | 2 | ||
| Gossypium raimondii | Orthologous gene family | 1-to-many | GR09G19700 GR10G00660 | 2 | |
| Tree-based ortholog | 1-to-many | GR09G19700 GR10G00660 GR05G11070 ... | 6 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR10G00660 | 1 | ||
| Lotus japonicus | Tree-based ortholog | 1-to-1 | LJ1G043250 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ1G043250 | 1 | ||
| Malus domestica | Orthologous gene family | 1-to-many | MD00G356800 MD12G015210 | 2 | |
| Tree-based ortholog | 1-to-many | MD00G356800 MD12G015210 MD10G007920 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD12G015210 MD00G356800 | 2 | ||
| Manihot esculenta | Orthologous gene family | 1-to-1 | ME08030G00010 | 1 | |
| Tree-based ortholog | 1-to-many | ME08030G00010 ME02994G00330 ME09277G00070 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ME09277G00070 ME02994G00330 | 2 | ||
| Medicago truncatula | Orthologous gene family | 1-to-1 | MT1G023260 | 1 | |
| Tree-based ortholog | 1-to-many | MT1G023260 MT3G113070 MT4G071200 ... | 4 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT1G023260 | 1 | ||
| Oryza sativa ssp. japonica | Tree-based ortholog | 1-to-many | OS06G49880 OS02G43170 OS04G45690 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS04G45690 | 1 | ||
| Ostreococcus lucimarinus | Tree-based ortholog | 1-to-many | OL04G03530 OL09G01350 OL08G02370 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL08G02370 | 1 | ||
| Physcomitrella patens | Tree-based ortholog | 1-to-many | PP00364G00020 PP00097G00580 PP00371G00140 ... | 9 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00098G00530 PP00545G00010 PP00235G00090 ... | 4 | ||
| Populus trichocarpa | Orthologous gene family | 1-to-many | PT02G02820 PT05G23450 | 2 | |
| Tree-based ortholog | 1-to-many | PT02G02820 PT05G23450 PT04G16100 ... | 4 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT05G23450 PT02G02820 | 2 | ||
| Prunus persica | Orthologous gene family | 1-to-1 | PPE_001G37930 | 1 | |
| Tree-based ortholog | 1-to-many | PPE_008G10580 PPE_001G37930 | 2 | ||
| Anchor point | N/A | PPE_007G18640 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_001G37930 | 1 | ||
| Ricinus communis | Orthologous gene family | 1-to-1 | RC30170G04830 | 1 | |
| Tree-based ortholog | 1-to-many | RC30170G04830 RC30131G02530 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC30170G04830 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | 1-to-many | SL04G081020 SL12G089240 | 2 | |
| Tree-based ortholog | 1-to-many | SL04G081020 SL12G089240 SL01G110180 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL04G081020 | 1 | ||
| Solanum tuberosum | Orthologous gene family | 1-to-many | ST04G034410 ST12G027420 | 2 | |
| Tree-based ortholog | 1-to-many | ST04G034410 ST12G027420 ST01G047610 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST04G034410 | 1 | ||
| Thellungiella parvula | Orthologous gene family | 1-to-1 | TP5G30670 | 1 | |
| Tree-based ortholog | 1-to-many | TP5G30670 TP7G36770 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP7G36770 | 1 | ||
| Theobroma cacao | Orthologous gene family | 1-to-1 | TC0008G03580 | 1 | |
| Tree-based ortholog | 1-to-many | TC0008G03580 TC0002G07410 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0008G03580 | 1 | ||
| Vitis vinifera | Orthologous gene family | 1-to-1 | VV18G09880 | 1 | |
| Tree-based ortholog | 1-to-many | VV18G09880 VV03G06160 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV18G09880 | 1 | ||
| Zea mays | Orthologous gene family | 1-to-many | ZM02G08270 ZM10G21090 | 2 | |
| Tree-based ortholog | 1-to-many | ZM06G10210 ZM05G15530 ZM10G21090 ... | 4 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ZM10G21090 ZM02G08270 | 2 |