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Integrative Orthology Viewer:
ATR_00001G01740
(Amborella trichopoda)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | ATR_00001G01740 | 1 |  |
| Tree-based ortholog | ATR_00001G01740 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | ATR_00001G01740 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Arabidopsis lyrata | Orthologous gene family | 1-to-many | AL5G25840 AL6G01130 AL6G05540 | 3 | |
| Tree-based ortholog | 1-to-1 | AL7G00290 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL7G00290 | 1 | ||
| Arabidopsis thaliana | Orthologous gene family | 1-to-many | AT3G55660 AT5G02010 AT5G05940 | 3 | |
| Tree-based ortholog | 1-to-1 | AT4G38430 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT4G38430 | 1 | ||
| Beta vulgaris | Tree-based ortholog | 1-to-1 | BV9G01480 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV9G01480 | 1 | ||
| Brassica rapa | Orthologous gene family | 1-to-many | BR09G36510 BR10G24180 BR10G28860 | 3 | |
| Tree-based ortholog | 1-to-1 | BR07G04510 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR07G04510 | 1 | ||
| Capsella rubella | Orthologous gene family | 1-to-1 | CRU_005G21080 | 1 | |
| Tree-based ortholog | 1-to-many | CRU_004G27560 CRU_006G35560 CRU_001G00460 ... | 6 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_007G00320 | 1 | ||
| Carica papaya | Tree-based ortholog | 1-to-1 | CP00020G01350 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00020G01350 | 1 | ||
| Citrullus lanatus | Orthologous gene family | 1-to-1 | CL10G19520 | 1 | |
| Tree-based ortholog | 1-to-1 | CL02G11560 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL02G11560 | 1 | ||
| Citrus sinensis | Orthologous gene family | 1-to-many | CS00002G06200 CS00023G01460 | 2 | |
| Tree-based ortholog | 1-to-many | CS00002G06200 CS00023G01460 | 2 | ||
| Anchor point | N/A | CS00002G06200 CS00023G01460 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00023G01460 | 1 | ||
| Cucumis melo | Tree-based ortholog | 1-to-1 | CM00020G02060 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00020G02060 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | 1-to-1 | EG0009G12090 | 1 | |
| Tree-based ortholog | 1-to-1 | EG0009G12090 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0009G12090 | 1 | ||
| Fragaria vesca | Orthologous gene family | 1-to-many | FV2G11110 FV2G37720 | 2 | |
| Tree-based ortholog | 1-to-many | FV2G37720 FV2G11110 | 2 | ||
| Anchor point | N/A | FV2G37720 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV2G11110 | 1 | ||
| Glycine max | Orthologous gene family | 1-to-many | GM01G26010 GM02G41980 GM03G16610 ... | 10 | |
| Tree-based ortholog | 1-to-many | GM12G02620 GM11G10330 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM11G10330 GM12G02620 | 2 | ||
| Gossypium raimondii | Orthologous gene family | 1-to-many | GR02G25890 GR06G17830 GR12G10870 | 3 | |
| Tree-based ortholog | 1-to-many | GR09G19020 GR05G25580 GR02G20200 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR05G25580 | 1 | ||
| Lotus japonicus | Tree-based ortholog | 1-to-1 | LJ3G049490 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ3G049490 | 1 | ||
| Malus domestica | Tree-based ortholog | 1-to-many | MD08G000500 MD00G048660 MD10G009680 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD00G048660 | 1 | ||
| Manihot esculenta | Orthologous gene family | 1-to-many | ME06908G00090 ME08265G02670 | 2 | |
| Tree-based ortholog | 1-to-many | ME02943G00700 ME03303G00120 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME03303G00120 | 1 | ||
| Medicago truncatula | Orthologous gene family | 1-to-many | MT3G069590 MT4G019770 MT4G075640 ... | 5 | |
| Tree-based ortholog | 1-to-1 | MT4G075640 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT4G075640 | 1 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | 1-to-many | OS01G62990 OS05G38000 | 2 | |
| Tree-based ortholog | 1-to-1 | OS09G37270 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS09G37270 | 1 | ||
| Ostreococcus lucimarinus | Tree-based ortholog | 1-to-1 | OL05G01600 | 1 | |
| Physcomitrella patens | Tree-based ortholog | 1-to-many | PP00007G01250 PP00028G00550 PP00034G02160 ... | 4 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00028G00550 PP00034G02160 PP00022G01230 ... | 5 | ||
| Populus trichocarpa | Orthologous gene family | 1-to-many | PT06G09260 PT08G06200 PT10G19600 ... | 4 | |
| Tree-based ortholog | 1-to-many | PT02G01410 PT05G24710 PT09G14010 | 3 | ||
| Anchor point | N/A | PT05G24710 PT09G14010 PT02G01410 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT09G14010 | 1 | ||
| Prunus persica | Orthologous gene family | 1-to-1 | PPE_006G27210 | 1 | |
| Tree-based ortholog | 1-to-many | PPE_001G36620 PPE_008G18920 | 2 | ||
| Anchor point | N/A | PPE_001G36620 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_008G18920 | 1 | ||
| Ricinus communis | Tree-based ortholog | 1-to-many | RC30170G06300 RC29683G00170 | 2 | |
| Anchor point | N/A | RC30170G06300 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29683G00170 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | 1-to-1 | SL01G111930 | 1 | |
| Tree-based ortholog | 1-to-many | SL04G082110 SL01G111930 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL01G111930 | 1 | ||
| Solanum tuberosum | Orthologous gene family | 1-to-1 | ST01G049340 | 1 | |
| Tree-based ortholog | 1-to-many | ST04G035490 ST01G049340 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST01G049340 | 1 | ||
| Thellungiella parvula | Orthologous gene family | 1-to-many | TP5G06810 TP6G36960 TP6G40430 | 3 | |
| Tree-based ortholog | 1-to-1 | TP3G21840 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP3G21840 | 1 | ||
| Theobroma cacao | Orthologous gene family | 1-to-many | TC0002G04990 TC0008G05220 | 2 | |
| Tree-based ortholog | 1-to-many | TC0008G05220 TC0002G04990 | 2 | ||
| Anchor point | N/A | TC0008G05220 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0002G04990 | 1 | ||
| Vitis vinifera | Orthologous gene family | 1-to-many | VV08G13710 VV13G04380 | 2 | |
| Tree-based ortholog | 1-to-1 | VV03G03600 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV03G03600 | 1 | ||
| Zea mays | Orthologous gene family | 1-to-many | ZM03G26900 ZM08G14270 | 2 | |
| Tree-based ortholog | 1-to-many | ZM07G21650 ZM02G34470 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM02G34470 | 1 |