Integrative Orthology Viewer: ATR_00001G00620 (Amborella trichopoda)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | ATR_00001G00590 ATR_00001G00600 ATR_00001G00620 ... | 4 | |
Tree-based ortholog | ATR_00001G00600 ATR_00001G00620 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | ATR_00001G00620 ATR_00001G00590 | 2 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Arabidopsis lyrata | Orthologous gene family | many-to-many | AL1G39120 AL3G01810 AL3G01820 ... | 6 | |
Tree-based ortholog | many-to-1 | AL4G31290 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AL4G31290 | 1 | ||
Arabidopsis thaliana | Orthologous gene family | many-to-many | AT1G43800 AT2G43710 AT3G02610 ... | 7 | |
Tree-based ortholog | many-to-1 | AT2G43710 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT2G43710 | 1 | ||
Beta vulgaris | Orthologous gene family | many-to-many | BV3G14100 BV3G14130 BV4G14730 | 3 | |
Tree-based ortholog | many-to-1 | BV3G14130 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BV4G14730 | 1 | ||
Brassica rapa | Orthologous gene family | many-to-many | BR01G35300 BR03G21690 BR03G29030 ... | 7 | |
Tree-based ortholog | many-to-many | BR05G03690 BR03G21690 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BR05G03690 | 1 | ||
Capsella rubella | Orthologous gene family | many-to-many | CRU_001G33050 CRU_003G01630 CRU_004G25260 ... | 5 | |
Tree-based ortholog | many-to-1 | CRU_004G25260 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CRU_004G25260 | 1 | ||
Carica papaya | Orthologous gene family | many-to-1 | CP00049G00670 | 1 | |
Tree-based ortholog | many-to-1 | CP00009G03610 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00049G00670 | 1 | ||
Chlamydomonas reinhardtii | Orthologous gene family | many-to-1 | CR17G01240 | 1 | |
Tree-based ortholog | many-to-many | CR14G05250 CR17G01240 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CR17G01240 | 1 | ||
Citrullus lanatus | Orthologous gene family | many-to-many | CL08G06430 CL08G16750 CL08G16760 ... | 4 | |
Tree-based ortholog | many-to-many | CL08G16750 CL08G16760 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CL08G16760 | 1 | ||
Citrus sinensis | Orthologous gene family | many-to-many | CS00004G04560 CS00037G00100 CS00238G00170 ... | 4 | |
Tree-based ortholog | many-to-1 | CS00037G00100 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CS00037G00100 | 1 | ||
Cucumis melo | Orthologous gene family | many-to-many | CM00008G03660 CM00009G01820 CM00014G00870 | 3 | |
Tree-based ortholog | many-to-1 | CM00014G00870 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CM00014G00870 | 1 | ||
Eucalyptus grandis | Orthologous gene family | many-to-many | EG0006G22720 EG0008G02660 EG0008G02670 ... | 13 | |
Tree-based ortholog | many-to-many | EG0008G02780 EG0012G00080 EG0008G02770 ... | 13 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | EG0008G02780 | 1 | ||
Fragaria vesca | Orthologous gene family | many-to-many | FV0G45770 FV2G23060 FV6G00260 | 3 | |
Tree-based ortholog | many-to-1 | FV0G45770 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | FV0G45770 | 1 | ||
Glycine max | Orthologous gene family | many-to-many | GM02G15600 GM07G32850 GM13G08986 ... | 4 | |
Tree-based ortholog | many-to-many | GM02G15600 GM07G32850 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | GM02G15600 GM07G32850 | 2 | ||
Gossypium raimondii | Orthologous gene family | many-to-many | GR01G13670 GR03G09390 GR05G12330 ... | 9 | |
Tree-based ortholog | many-to-many | GR09G35190 GR09G35220 GR11G13520 ... | 7 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | GR11G13480 | 1 | ||
Lotus japonicus | Orthologous gene family | many-to-many | LJ1G003560 LJ4G011740 | 2 | |
Tree-based ortholog | many-to-1 | LJ4G011740 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | LJ4G011740 | 1 | ||
Malus domestica | Orthologous gene family | many-to-many | MD00G336240 MD04G020180 MD12G025480 | 3 | |
Tree-based ortholog | many-to-many | MD00G130640 MD04G000910 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | MD04G020180 MD12G025480 | 2 | ||
Manihot esculenta | Orthologous gene family | many-to-many | ME00784G00120 ME01098G00050 ME05356G00010 ... | 7 | |
Tree-based ortholog | many-to-many | ME08393G00090 ME10045G00260 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ME10045G00260 | 1 | ||
Medicago truncatula | Orthologous gene family | many-to-many | MT1G029150 MT3G089025 MT3G090010 ... | 7 | |
Tree-based ortholog | many-to-many | MT5G024130 MT4G087440 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | MT5G024130 MT4G087440 | 2 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS01G65830 OS01G69080 OS02G30200 ... | 4 | |
Tree-based ortholog | many-to-many | OS01G69080 OS04G31070 OS02G30200 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS04G31070 | 1 | ||
Ostreococcus lucimarinus | Orthologous gene family | many-to-1 | OL04G03430 | 1 | |
Tree-based ortholog | many-to-1 | OL04G03430 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OL04G03430 | 1 | ||
Physcomitrella patens | Orthologous gene family | many-to-many | PP00146G00040 PP00157G00270 PP00181G00480 ... | 5 | |
Tree-based ortholog | many-to-many | PP00146G00040 PP00354G00130 PP00157G00270 ... | 7 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | PP00146G00040 PP00354G00130 PP00181G00480 ... | 4 | ||
Populus trichocarpa | Orthologous gene family | many-to-many | PT00G12890 PT05G18760 PT08G07790 ... | 6 | |
Tree-based ortholog | many-to-1 | PT13G12730 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PT13G12730 | 1 | ||
Prunus persica | Orthologous gene family | many-to-many | PPE_001G20740 PPE_006G36740 PPE_008G01980 | 3 | |
Tree-based ortholog | many-to-1 | PPE_001G20740 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PPE_006G36730 | 1 | ||
Ricinus communis | Orthologous gene family | many-to-many | RC27985G00380 RC29929G00170 RC30020G00040 | 3 | |
Tree-based ortholog | many-to-1 | RC30020G00040 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | RC30020G00040 | 1 | ||
Solanum lycopersicum | Orthologous gene family | many-to-many | SL03G063110 SL06G053480 SL06G054670 ... | 6 | |
Tree-based ortholog | many-to-1 | SL06G053480 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SL06G053480 | 1 | ||
Solanum tuberosum | Orthologous gene family | many-to-many | ST03G010830 ST06G009530 ST06G017450 ... | 8 | |
Tree-based ortholog | many-to-1 | ST06G017450 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ST06G017450 | 1 | ||
Thellungiella parvula | Orthologous gene family | many-to-many | TP1G32960 TP3G01650 TP3G01660 ... | 6 | |
Tree-based ortholog | many-to-1 | TP4G25780 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TP4G25780 | 1 | ||
Theobroma cacao | Orthologous gene family | many-to-many | TC0004G05120 TC0004G16970 TC0004G16980 ... | 6 | |
Tree-based ortholog | many-to-many | TC0009G23760 TC0004G17000 TC0004G16980 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TC0004G16970 | 1 | ||
Vitis vinifera | Orthologous gene family | many-to-many | VV00G19770 VV05G13280 VV05G13310 ... | 7 | |
Tree-based ortholog | many-to-many | VV05G13340 VV05G13430 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV05G13310 | 1 | ||
Zea mays | Orthologous gene family | many-to-many | ZM02G17920 ZM03G22910 ZM04G15580 ... | 5 | |
Tree-based ortholog | many-to-many | ZM03G22910 ZM08G29070 ZM10G14930 ... | 5 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | ZM08G29070 ZM03G22910 | 2 |