Integrative Orthology Viewer: ATR_00001G00450 (Amborella trichopoda)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | ATR_00001G00450 ATR_00029G01500 | 2 | |
Tree-based ortholog | ATR_00029G01500 ATR_00001G00450 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | ATR_00001G00450 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Arabidopsis lyrata | Orthologous gene family | many-to-1 | AL5G25410 | 1 | |
Tree-based ortholog | many-to-many | AL5G25410 AL4G25940 AL0G10400 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL5G25410 | 1 | ||
Arabidopsis thaliana | Orthologous gene family | many-to-1 | AT3G55280 | 1 | |
Tree-based ortholog | many-to-many | AT3G55280 AT2G39460 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT3G55280 | 1 | ||
Beta vulgaris | Orthologous gene family | many-to-many | BV2G03160 BV9G05200 | 2 | |
Tree-based ortholog | many-to-1 | BV9G04510 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV2G03160 | 1 | ||
Brassica rapa | Orthologous gene family | many-to-many | BR03G19830 BR05G06270 | 2 | |
Tree-based ortholog | many-to-many | BR04G23460 BR05G06270 BR03G19830 ... | 6 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR05G06270 | 1 | ||
Capsella rubella | Orthologous gene family | many-to-1 | CRU_005G20640 | 1 | |
Tree-based ortholog | many-to-many | CRU_007G02410 CRU_005G20640 CRU_004G20830 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_005G20640 | 1 | ||
Carica papaya | Orthologous gene family | many-to-1 | CP00252G00200 | 1 | |
Tree-based ortholog | many-to-many | CP00001G03300 CP00252G00200 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00001G03300 | 1 | ||
Chlamydomonas reinhardtii | Orthologous gene family | many-to-1 | CR06G09570 | 1 | |
Tree-based ortholog | many-to-1 | CR06G09570 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR06G09570 | 1 | ||
Citrullus lanatus | Orthologous gene family | many-to-1 | CL07G03690 | 1 | |
Tree-based ortholog | many-to-many | CL07G03690 CL11G18050 CL09G20540 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL07G03690 | 1 | ||
Citrus sinensis | Orthologous gene family | many-to-1 | CS00024G01000 | 1 | |
Tree-based ortholog | many-to-1 | CS00014G01000 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00024G01000 | 1 | ||
Cucumis melo | Orthologous gene family | many-to-1 | CM00063G00370 | 1 | |
Tree-based ortholog | many-to-many | CM00063G00370 CM00053G00630 CM00079G00400 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00063G00370 | 1 | ||
Eucalyptus grandis | Orthologous gene family | many-to-many | EG0007G22990 EG2180G00010 | 2 | |
Tree-based ortholog | many-to-many | EG2180G00010 EG0007G22990 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | EG0007G22990 EG2180G00010 | 2 | ||
Fragaria vesca | Orthologous gene family | many-to-1 | FV0G32140 | 1 | |
Tree-based ortholog | many-to-1 | FV7G27530 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV0G32140 | 1 | ||
Glycine max | Orthologous gene family | many-to-many | GM02G10550 GM15G04670 GM18G52310 | 3 | |
Tree-based ortholog | many-to-many | GM02G10550 GM18G52310 GM12G07160 ... | 6 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GM13G40780 | 1 | ||
Gossypium raimondii | Orthologous gene family | many-to-many | GR09G10180 GR11G24930 | 2 | |
Tree-based ortholog | many-to-many | GR11G24930 GR01G10760 GR04G00380 ... | 5 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR09G10180 | 1 | ||
Malus domestica | Orthologous gene family | many-to-many | MD00G164110 MD11G008590 | 2 | |
Tree-based ortholog | many-to-many | MD00G159240 MD01G011510 MD01G011340 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD01G011510 | 1 | ||
Manihot esculenta | Orthologous gene family | many-to-many | ME00506G00440 ME03750G00070 ME08265G01540 | 3 | |
Tree-based ortholog | many-to-many | ME03750G00070 ME00506G00440 ME08265G01540 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME08265G01540 | 1 | ||
Medicago truncatula | Orthologous gene family | many-to-1 | MT4G063060 | 1 | |
Tree-based ortholog | many-to-many | MT2G096340 MT7G023260 MT4G063060 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT4G063060 | 1 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-1 | OS01G24690 | 1 | |
Tree-based ortholog | many-to-many | OS01G24690 OS04G42270 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS01G24690 | 1 | ||
Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL08G04100 | 1 | |
Physcomitrella patens | Orthologous gene family | many-to-many | PP00046G00280 PP00047G01410 PP00146G00170 ... | 4 | |
Tree-based ortholog | many-to-many | PP00046G00280 PP00146G00170 PP00047G01410 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00459G00060 PP00047G01410 PP00046G00280 ... | 4 | ||
Populus trichocarpa | Orthologous gene family | many-to-many | PT06G21330 PT16G07980 | 2 | |
Tree-based ortholog | many-to-many | PT06G21330 PT16G07980 PT08G05020 ... | 5 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT06G21330 PT16G07980 | 2 | ||
Prunus persica | Orthologous gene family | many-to-many | PPE_002G22090 PPE_006G08380 | 2 | |
Tree-based ortholog | many-to-1 | PPE_002G22090 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_002G22090 | 1 | ||
Ricinus communis | Orthologous gene family | many-to-1 | RC28180G00080 | 1 | |
Tree-based ortholog | many-to-many | RC29788G00120 RC28180G00080 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC28180G00080 | 1 | ||
Solanum lycopersicum | Orthologous gene family | many-to-1 | SL10G084610 | 1 | |
Tree-based ortholog | many-to-many | SL02G092080 SL09G005720 SL10G086330 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL10G084610 | 1 | ||
Solanum tuberosum | Tree-based ortholog | many-to-many | ST09G005660 ST10G028510 ST10G024330 ... | 4 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST10G024330 | 1 | ||
Thellungiella parvula | Orthologous gene family | many-to-1 | TP4G21760 | 1 | |
Tree-based ortholog | many-to-many | TP4G21760 TP5G07180 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP4G21760 | 1 | ||
Theobroma cacao | Orthologous gene family | many-to-1 | TC0010G05370 | 1 | |
Tree-based ortholog | many-to-many | TC0009G32300 TC0010G05370 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0009G32300 | 1 | ||
Vitis vinifera | Orthologous gene family | many-to-1 | VV06G04200 | 1 | |
Tree-based ortholog | many-to-1 | VV06G04200 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV06G04200 | 1 | ||
Zea mays | Tree-based ortholog | many-to-many | ZM10G11100 ZM10G19680 ZM06G18710 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ZM06G18710 ZM10G19680 | 2 |