Integrative Orthology Viewer: ATCG00720 (Arabidopsis thaliana)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Arabidopsis thaliana | Orthologous gene family | ATCG00720 | 1 | |
Tree-based ortholog | ATCG00720 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | ATCG00720 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | 1-to-1 | ATR_CG00720 | 1 | |
Tree-based ortholog | 1-to-1 | ATR_CG00720 | 1 | ||
Anchor point | N/A | ATR_CG00720 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_CG00720 | 1 | ||
Arabidopsis lyrata | Orthologous gene family | 1-to-1 | AL2G09970 | 1 | |
Tree-based ortholog | 1-to-1 | AL2G09970 | 1 | ||
Anchor point | N/A | AL2G09970 AL2G10900 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL2G09970 | 1 | ||
Beta vulgaris | Orthologous gene family | 1-to-1 | BV1G10720 | 1 | |
Tree-based ortholog | 1-to-1 | BV1G10720 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV1G10720 | 1 | ||
Brassica rapa | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BRMG00440 | 1 | |
Capsella rubella | Orthologous gene family | 1-to-1 | CRU_006G24810 | 1 | |
Tree-based ortholog | 1-to-1 | CRU_006G24810 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_006G24810 | 1 | ||
Carica papaya | Orthologous gene family | 1-to-1 | CPCG00730 | 1 | |
Tree-based ortholog | 1-to-1 | CPCG00730 | 1 | ||
Anchor point | N/A | CPCG00730 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CPCG00730 | 1 | ||
Chlamydomonas reinhardtii | Orthologous gene family | 1-to-1 | CRCG00170 | 1 | |
Tree-based ortholog | 1-to-1 | CRCG00170 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRCG00170 | 1 | ||
Citrullus lanatus | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CLMG00430 | 1 | |
Citrus sinensis | Orthologous gene family | 1-to-1 | CSCG00770 | 1 | |
Tree-based ortholog | 1-to-1 | CSCG00770 | 1 | ||
Anchor point | N/A | CSCG00770 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CSCG00770 | 1 | ||
Cucumis melo | Orthologous gene family | 1-to-1 | CMCG00730 | 1 | |
Tree-based ortholog | 1-to-many | CM32403G00020 CMCG00730 | 2 | ||
Anchor point | N/A | CMCG00730 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CMCG00730 | 1 | ||
Eucalyptus grandis | Orthologous gene family | 1-to-1 | EGCG00660 | 1 | |
Tree-based ortholog | 1-to-many | EGCG00660 EG0004G07950 | 2 | ||
Anchor point | N/A | EGCG00660 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EGCG00660 | 1 | ||
Glycine max | Orthologous gene family | 1-to-1 | GMCG00720 | 1 | |
Tree-based ortholog | 1-to-many | GMCG00720 GM01G07130 | 2 | ||
Anchor point | N/A | GMCG00720 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GMCG00720 | 1 | ||
Gossypium raimondii | Orthologous gene family | 1-to-1 | GRCG00730 | 1 | |
Tree-based ortholog | 1-to-1 | GRCG00730 | 1 | ||
Anchor point | N/A | GRCG00730 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GRCG00730 | 1 | ||
Lotus japonicus | Orthologous gene family | 1-to-1 | LJCG00720 | 1 | |
Tree-based ortholog | 1-to-1 | LJCG00720 | 1 | ||
Anchor point | N/A | LJCG00720 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJCG00720 | 1 | ||
Manihot esculenta | Orthologous gene family | 1-to-1 | MECG00770 | 1 | |
Tree-based ortholog | 1-to-many | ME04355G00030 MECG00770 | 2 | ||
Anchor point | N/A | ME04355G00030 MECG00770 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MECG00770 | 1 | ||
Medicago truncatula | Orthologous gene family | 1-to-many | MT00G15620 MT4G034790 | 2 | |
Tree-based ortholog | 1-to-many | MT4G034790 MT7G100030 | 2 | ||
Anchor point | N/A | MT4G034790 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MT4G034790 MT00G15620 | 2 | ||
Oryza sativa ssp. japonica | Orthologous gene family | 1-to-many | OS01G57942 OS04G16846 OS10G21324 ... | 4 | |
Tree-based ortholog | 1-to-many | OS04G16846 OS10G21324 OS01G57942 ... | 4 | ||
Anchor point | N/A | OS10G21324 OSCG00810 OS01G57942 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | OS10G21324 OSCG00810 OS01G57942 ... | 4 | ||
Physcomitrella patens | Orthologous gene family | 1-to-1 | PPCG00090 | 1 | |
Tree-based ortholog | 1-to-many | PPCG00090 PP00027G01150 | 2 | ||
Anchor point | N/A | PPCG00090 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPCG00090 | 1 | ||
Populus trichocarpa | Orthologous gene family | 1-to-many | PT13G13670 PTCG00750 | 2 | |
Tree-based ortholog | 1-to-many | PT01G18810 PT11G07470 PT09G00500 ... | 8 | ||
Anchor point | N/A | PT11G07470 PT11G11350 PT13G13670 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PTCG00750 | 1 | ||
Solanum lycopersicum | Orthologous gene family | 1-to-many | SL01G007530 SL01G007540 SLCG00730 | 3 | |
Tree-based ortholog | 1-to-many | SL01G017740 SL01G007530 SLCG00730 | 3 | ||
Anchor point | N/A | SL01G007530 SLCG00730 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SLCG00730 | 1 | ||
Solanum tuberosum | Orthologous gene family | 1-to-many | ST01G017090 STCG00700 | 2 | |
Tree-based ortholog | 1-to-1 | STCG00700 | 1 | ||
Anchor point | N/A | STCG00700 ST01G019530 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | STCG00700 | 1 | ||
Thellungiella parvula | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP3G25700 | 1 | |
Theobroma cacao | Orthologous gene family | 1-to-1 | TCCG00730 | 1 | |
Tree-based ortholog | 1-to-1 | TCCG00730 | 1 | ||
Anchor point | N/A | TCCG00730 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TCCG00730 | 1 | ||
Vitis vinifera | Orthologous gene family | 1-to-1 | VVCG00770 | 1 | |
Tree-based ortholog | 1-to-1 | VVCG00770 | 1 | ||
Anchor point | N/A | VVCG00770 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VVCG00770 | 1 | ||
Zea mays | Orthologous gene family | 1-to-many | ZM05G08740 ZMCG00220 ZMCG00730 | 3 | |
Tree-based ortholog | 1-to-many | ZM04G33750 ZMCG00730 ZMCG00220 ... | 4 | ||
Anchor point | N/A | ZMCG00730 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ZMCG00220 ZMCG00730 ZM05G08740 | 3 |