Integrative Orthology Viewer: AT5G66920 (Arabidopsis thaliana)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Arabidopsis thaliana | Orthologous gene family | AT1G55560 AT1G55570 AT3G13390 ... | 5 | |
Tree-based ortholog | AT5G66920 | 1 | ||
Anchor point | AT2G23630 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | AT5G66920 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Tree-based ortholog | 1-to-1 | ATR_00169G00310 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00169G00310 | 1 | ||
Arabidopsis lyrata | Orthologous gene family | many-to-many | AL1G50180 AL1G50190 AL3G13910 ... | 4 | |
Tree-based ortholog | 1-to-many | AL7G03760 AL4G03390 | 2 | ||
Anchor point | 1-to-many | AL4G03390 AL7G03760 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL4G03390 | 1 | ||
Beta vulgaris | Orthologous gene family | many-to-many | BV4G14500 BV4G14510 | 2 | |
Tree-based ortholog | 1-to-1 | BV6G09270 | 1 | ||
Anchor point | 1-to-1 | BV6G09270 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV6G09270 | 1 | ||
Brassica rapa | Orthologous gene family | many-to-many | BR02G23600 BR03G33480 BR03G33490 ... | 10 | |
Tree-based ortholog | 1-to-many | BR09G08340 BR09G33140 | 2 | ||
Anchor point | 1-to-many | BR07G11530 BR01G01810 BR09G08340 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR09G08340 | 1 | ||
Capsella rubella | Orthologous gene family | many-to-many | CRU_001G32400 CRU_001G41970 CRU_001G41980 ... | 6 | |
Tree-based ortholog | 1-to-1 | CRU_008G26740 | 1 | ||
Anchor point | 1-to-many | CRU_007G03100 CRU_008G26740 CRU_004G02770 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_008G26740 | 1 | ||
Carica papaya | Orthologous gene family | many-to-many | CP00006G03930 CP00119G00040 | 2 | |
Tree-based ortholog | 1-to-1 | CP00006G03920 | 1 | ||
Anchor point | 1-to-1 | CP00006G03920 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00006G03920 | 1 | ||
Citrullus lanatus | Tree-based ortholog | 1-to-1 | CL01G16890 | 1 | |
Anchor point | 1-to-many | CL01G16890 CL02G13140 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL01G16890 | 1 | ||
Citrus sinensis | Orthologous gene family | many-to-1 | CS00123G00530 | 1 | |
Tree-based ortholog | 1-to-1 | CS00006G02510 | 1 | ||
Anchor point | 1-to-1 | CS00006G02510 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00006G02510 | 1 | ||
Cucumis melo | Tree-based ortholog | 1-to-1 | CM00007G05640 | 1 | |
Anchor point | 1-to-many | CM00045G01750 CM00007G05640 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00007G05640 | 1 | ||
Eucalyptus grandis | Orthologous gene family | many-to-many | EG0002G29850 EG0010G14940 EG0010G14950 | 3 | |
Tree-based ortholog | 1-to-many | EG0009G07630 EG0008G16480 | 2 | ||
Anchor point | 1-to-1 | EG0009G07630 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0009G07630 | 1 | ||
Fragaria vesca | Orthologous gene family | many-to-many | FV5G36950 FV6G28670 | 2 | |
Tree-based ortholog | 1-to-1 | FV5G36940 | 1 | ||
Anchor point | 1-to-1 | FV5G36940 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV5G36940 | 1 | ||
Glycine max | Orthologous gene family | many-to-many | GM07G35170 GM07G35180 GM20G03030 | 3 | |
Tree-based ortholog | 1-to-many | GM05G17432 GM17G21490 GM11G06290 ... | 4 | ||
Anchor point | 1-to-many | GM17G01580 GM11G06290 GM01G38980 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GM17G21490 | 1 | ||
Gossypium raimondii | Orthologous gene family | many-to-many | GR02G17360 GR08G07300 GR13G24480 ... | 5 | |
Tree-based ortholog | 1-to-many | GR11G10440 GR07G20990 GR07G05290 | 3 | ||
Anchor point | 1-to-many | GR08G07300 GR07G20970 GR11G10440 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR07G05290 | 1 | ||
Lotus japonicus | Orthologous gene family | many-to-many | LJ4G014040 LJ4G014070 LJ6G002320 | 3 | |
Tree-based ortholog | 1-to-many | LJ4G014040 LJ6G002320 LJ6G001860 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ6G022180 | 1 | ||
Malus domestica | Orthologous gene family | many-to-many | MD00G104730 MD00G104760 MD00G501000 ... | 5 | |
Tree-based ortholog | 1-to-many | MD15G020580 MD00G501020 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD15G020580 MD00G501020 | 2 | ||
Manihot esculenta | Orthologous gene family | many-to-many | ME04300G00160 ME06582G00900 ME12587G00070 | 3 | |
Tree-based ortholog | 1-to-many | ME03235G00340 ME10441G00010 | 2 | ||
Anchor point | 1-to-1 | ME03235G00340 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME03235G00340 | 1 | ||
Medicago truncatula | Orthologous gene family | many-to-many | MT3G083390 MT3G083400 MT3G083430 ... | 6 | |
Tree-based ortholog | 1-to-many | MT8G479390 MT5G018270 | 2 | ||
Anchor point | 1-to-1 | MT8G479380 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT8G479390 | 1 | ||
Oryza sativa ssp. japonica | Tree-based ortholog | 1-to-1 | OS07G02810 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS07G02810 | 1 | ||
Physcomitrella patens | Tree-based ortholog | 1-to-1 | PP00217G00360 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PP00217G00360 | 1 | ||
Populus trichocarpa | Orthologous gene family | many-to-many | PT01G00050 PT01G00060 PT03G22410 | 3 | |
Tree-based ortholog | 1-to-1 | PT07G03830 | 1 | ||
Anchor point | 1-to-1 | PT07G03820 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT07G03830 | 1 | ||
Prunus persica | Orthologous gene family | many-to-many | PPE_006G01850 PPE_006G01860 | 2 | |
Tree-based ortholog | 1-to-1 | PPE_007G16210 | 1 | ||
Anchor point | 1-to-1 | PPE_007G16210 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_007G16210 | 1 | ||
Ricinus communis | Orthologous gene family | many-to-1 | RC28842G00070 | 1 | |
Tree-based ortholog | 1-to-1 | RC29676G00350 | 1 | ||
Anchor point | 1-to-1 | RC29676G00350 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29676G00350 | 1 | ||
Solanum lycopersicum | Orthologous gene family | many-to-many | SL01G005510 SL01G056310 SL11G008860 | 3 | |
Tree-based ortholog | 1-to-many | SL02G090360 SL02G065170 | 2 | ||
Anchor point | 1-to-many | SL02G065170 SL02G090360 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL02G090360 | 1 | ||
Solanum tuberosum | Orthologous gene family | many-to-many | ST01G005730 ST01G011080 ST03G010800 ... | 5 | |
Tree-based ortholog | 1-to-many | ST02G032620 ST02G011890 | 2 | ||
Anchor point | 1-to-many | ST02G032620 ST02G011890 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST02G032620 | 1 | ||
Thellungiella parvula | Orthologous gene family | many-to-many | TP1G18140 TP1G31990 TP1G41190 ... | 7 | |
Tree-based ortholog | 1-to-1 | TP2G29740 | 1 | ||
Anchor point | 1-to-many | TP7G34630 TP2G29740 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP2G29740 | 1 | ||
Theobroma cacao | Orthologous gene family | many-to-1 | TC0009G20310 | 1 | |
Tree-based ortholog | 1-to-1 | TC0001G04750 | 1 | ||
Anchor point | 1-to-1 | TC0001G04740 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0001G04750 | 1 | ||
Vitis vinifera | Orthologous gene family | many-to-many | VV00G09560 VV00G13200 | 2 | |
Tree-based ortholog | 1-to-1 | VV00G11620 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV00G11620 | 1 | ||
Zea mays | Tree-based ortholog | 1-to-many | ZM07G00900 ZM01G48720 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM07G22740 | 1 |