Integrative Orthology Viewer: AT5G66190 (Arabidopsis thaliana)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Arabidopsis thaliana | Orthologous gene family | AT1G20020 AT5G66190 | 2 | |
Tree-based ortholog | AT5G66190 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | AT5G66190 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | many-to-1 | ATR_00016G00680 | 1 | |
Tree-based ortholog | 1-to-1 | ATR_00016G00680 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00016G00680 | 1 | ||
Arabidopsis lyrata | Orthologous gene family | many-to-1 | AL8G34490 | 1 | |
Tree-based ortholog | 1-to-1 | AL8G34490 | 1 | ||
Anchor point | N/A | AL8G34490 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL8G34490 | 1 | ||
Beta vulgaris | Tree-based ortholog | 1-to-1 | BV6G17340 | 1 | |
Anchor point | N/A | BV6G17340 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV6G17340 | 1 | ||
Brassica rapa | Orthologous gene family | many-to-1 | BR02G41630 | 1 | |
Tree-based ortholog | 1-to-1 | BR09G07890 | 1 | ||
Anchor point | N/A | BR07G12130 BR09G07890 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR09G07890 | 1 | ||
Capsella rubella | Orthologous gene family | many-to-many | CRU_001G18730 CRU_008G27460 | 2 | |
Tree-based ortholog | 1-to-1 | CRU_008G27460 | 1 | ||
Anchor point | N/A | CRU_008G27460 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_008G27460 | 1 | ||
Carica papaya | Orthologous gene family | many-to-1 | CP00006G02540 | 1 | |
Tree-based ortholog | 1-to-1 | CP00006G02540 | 1 | ||
Anchor point | N/A | CP00006G02540 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00006G02540 | 1 | ||
Chlamydomonas reinhardtii | Tree-based ortholog | 1-to-1 | CR11G03810 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR11G03810 | 1 | ||
Citrullus lanatus | Orthologous gene family | many-to-1 | CL10G01450 | 1 | |
Tree-based ortholog | 1-to-1 | CL10G01450 | 1 | ||
Anchor point | N/A | CL10G01450 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL10G01450 | 1 | ||
Citrus sinensis | Orthologous gene family | many-to-1 | CS00017G01220 | 1 | |
Tree-based ortholog | 1-to-1 | CS00017G01220 | 1 | ||
Anchor point | N/A | CS00017G01220 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00017G01220 | 1 | ||
Cucumis melo | Orthologous gene family | many-to-1 | CM00021G00720 | 1 | |
Tree-based ortholog | 1-to-1 | CM00021G00720 | 1 | ||
Anchor point | N/A | CM00021G00720 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00021G00720 | 1 | ||
Eucalyptus grandis | Orthologous gene family | many-to-1 | EG0009G19700 | 1 | |
Tree-based ortholog | 1-to-1 | EG0009G19700 | 1 | ||
Anchor point | N/A | EG0009G19700 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0009G19700 | 1 | ||
Fragaria vesca | Orthologous gene family | many-to-1 | FV1G13600 | 1 | |
Tree-based ortholog | 1-to-1 | FV1G13600 | 1 | ||
Anchor point | N/A | FV1G13600 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV1G13600 | 1 | ||
Glycine max | Orthologous gene family | many-to-many | GM02G05350 GM11G08230 GM16G23710 | 3 | |
Tree-based ortholog | 1-to-many | GM02G05350 GM16G23710 GM11G08230 | 3 | ||
Anchor point | N/A | GM01G37051 GM11G08230 GM02G05350 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM11G08230 GM02G05350 GM16G23710 | 3 | ||
Gossypium raimondii | Orthologous gene family | many-to-many | GR07G19380 GR09G19420 | 2 | |
Tree-based ortholog | 1-to-many | GR07G19380 GR08G06260 | 2 | ||
Anchor point | N/A | GR07G19380 GR08G06260 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR07G19380 | 1 | ||
Lotus japonicus | Tree-based ortholog | 1-to-1 | LJ4G019160 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ4G019160 | 1 | ||
Malus domestica | Orthologous gene family | many-to-many | MD00G107660 MD02G011340 | 2 | |
Tree-based ortholog | 1-to-many | MD02G011340 MD00G107660 | 2 | ||
Anchor point | N/A | MD02G011340 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD00G107660 MD02G011340 | 2 | ||
Manihot esculenta | Orthologous gene family | many-to-many | ME06512G01150 ME07520G02650 | 2 | |
Tree-based ortholog | 1-to-many | ME06512G01150 ME07520G02650 | 2 | ||
Anchor point | N/A | ME06512G01150 ME07520G02650 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME06512G01150 | 1 | ||
Medicago truncatula | Orthologous gene family | many-to-1 | MT5G022300 | 1 | |
Tree-based ortholog | 1-to-1 | MT5G022300 | 1 | ||
Anchor point | N/A | MT5G022300 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT5G022300 | 1 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-1 | OS06G01850 | 1 | |
Tree-based ortholog | 1-to-many | OS02G01340 OS06G01850 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS06G01850 | 1 | ||
Ostreococcus lucimarinus | Tree-based ortholog | 1-to-1 | OL17G01310 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL17G01310 | 1 | ||
Physcomitrella patens | Tree-based ortholog | 1-to-many | PP00131G00900 PP00131G00810 PP00174G00490 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00174G00490 PP00131G00900 PP00131G00810 | 3 | ||
Populus trichocarpa | Orthologous gene family | many-to-many | PT05G11290 PT07G05720 | 2 | |
Tree-based ortholog | 1-to-many | PT07G05720 PT05G11290 | 2 | ||
Anchor point | N/A | PT05G11290 PT07G05720 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT05G11290 PT07G05720 | 2 | ||
Prunus persica | Orthologous gene family | many-to-1 | PPE_007G18990 | 1 | |
Tree-based ortholog | 1-to-1 | PPE_007G18990 | 1 | ||
Anchor point | N/A | PPE_007G18990 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_007G18990 | 1 | ||
Ricinus communis | Orthologous gene family | many-to-many | RC29405G00080 RC30170G05540 | 2 | |
Tree-based ortholog | 1-to-1 | RC29405G00080 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC30170G05540 | 1 | ||
Solanum lycopersicum | Orthologous gene family | many-to-1 | SL02G062130 | 1 | |
Tree-based ortholog | 1-to-many | SL02G083810 SL02G062130 | 2 | ||
Anchor point | N/A | SL02G083810 SL02G062130 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL02G062130 | 1 | ||
Solanum tuberosum | Orthologous gene family | many-to-1 | ST02G027160 | 1 | |
Tree-based ortholog | 1-to-many | ST02G027160 ST02G009720 | 2 | ||
Anchor point | N/A | ST02G027160 ST02G009720 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST02G027160 | 1 | ||
Thellungiella parvula | Orthologous gene family | many-to-many | TP1G17790 TP2G30500 | 2 | |
Tree-based ortholog | 1-to-1 | TP2G30500 | 1 | ||
Anchor point | N/A | TP2G30500 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP2G30500 | 1 | ||
Theobroma cacao | Orthologous gene family | many-to-1 | TC0001G01670 | 1 | |
Tree-based ortholog | 1-to-1 | TC0001G01670 | 1 | ||
Anchor point | N/A | TC0001G01670 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0001G01670 | 1 | ||
Vitis vinifera | Orthologous gene family | many-to-many | VV04G00700 VV18G10740 | 2 | |
Tree-based ortholog | 1-to-1 | VV04G00700 | 1 | ||
Anchor point | N/A | VV04G00700 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV04G00700 | 1 | ||
Zea mays | Orthologous gene family | many-to-many | ZM03G20540 ZM08G27570 ZM09G06660 | 3 | |
Tree-based ortholog | 1-to-many | ZM08G27570 ZM03G20540 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM09G06660 | 1 |