Integrative Orthology Viewer: AT5G65420 (Arabidopsis thaliana)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Arabidopsis thaliana | Orthologous gene family | AT5G65420 | 1 | |
Tree-based ortholog | AT5G65420 | 1 | ||
Anchor point | AT5G10440 AT2G22490 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | AT5G65420 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Tree-based ortholog | 1-to-1 | ATR_00190G00030 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00135G00290 | 1 | ||
Arabidopsis lyrata | Orthologous gene family | 1-to-1 | AL8G32230 | 1 | |
Tree-based ortholog | 1-to-1 | AL8G32230 | 1 | ||
Anchor point | many-to-many | AL6G10150 AL4G01950 AL8G32230 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL8G32230 | 1 | ||
Beta vulgaris | Tree-based ortholog | 1-to-1 | BV6G05460 | 1 | |
Anchor point | many-to-many | BV6G05460 BV1G10070 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV6G05460 | 1 | ||
Brassica rapa | Orthologous gene family | 1-to-1 | BR06G23290 | 1 | |
Tree-based ortholog | 1-to-many | BR02G41130 BR09G07240 BR06G23290 | 3 | ||
Anchor point | many-to-many | BR10G22970 BR06G23290 BR02G41130 ... | 5 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR06G23290 | 1 | ||
Capsella rubella | Tree-based ortholog | 1-to-1 | CRU_008G25490 | 1 | |
Anchor point | many-to-many | CRU_008G25490 CRU_004G01560 CRU_006G08690 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_008G25490 | 1 | ||
Carica papaya | Tree-based ortholog | 1-to-1 | CP00055G00360 | 1 | |
Anchor point | many-to-1 | CP00055G00360 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00309G00080 | 1 | ||
Chlamydomonas reinhardtii | Tree-based ortholog | 1-to-many | CR06G09980 CR09G11330 CR11G02450 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | CR06G11100 CR09G11330 CR11G02450 | 3 | ||
Citrullus lanatus | Tree-based ortholog | 1-to-1 | CL01G18730 | 1 | |
Anchor point | many-to-many | CL08G11230 CL01G18730 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL01G18730 | 1 | ||
Citrus sinensis | Tree-based ortholog | 1-to-1 | CS00004G02740 | 1 | |
Anchor point | many-to-many | CS00004G02740 CS00059G00420 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00004G02740 | 1 | ||
Cucumis melo | Tree-based ortholog | 1-to-1 | CM00007G07540 | 1 | |
Anchor point | many-to-many | CM00007G07540 CM00014G04320 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00007G07540 | 1 | ||
Eucalyptus grandis | Tree-based ortholog | 1-to-1 | EG0006G17270 | 1 | |
Anchor point | many-to-1 | EG0006G17270 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0006G17270 | 1 | ||
Fragaria vesca | Tree-based ortholog | 1-to-1 | FV1G26270 | 1 | |
Anchor point | many-to-1 | FV1G26270 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV1G26270 | 1 | ||
Glycine max | Tree-based ortholog | 1-to-many | GM02G04590 GM01G03030 GM08G38440 ... | 4 | |
Anchor point | many-to-many | GM04G09840 GM08G38440 GM01G03030 ... | 7 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GM01G03030 | 1 | ||
Gossypium raimondii | Tree-based ortholog | 1-to-many | GR08G09210 GR07G23360 GR07G05930 | 3 | |
Anchor point | many-to-many | GR07G05930 GR07G23360 GR10G03580 ... | 5 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GR07G05930 GR07G23360 GR08G09210 | 3 | ||
Lotus japonicus | Tree-based ortholog | 1-to-many | LJ5G036000 LJ3G040900 LJ4G035970 ... | 5 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ5G036000 | 1 | ||
Malus domestica | Tree-based ortholog | 1-to-many | MD11G014760 MD03G021590 | 2 | |
Anchor point | many-to-1 | MD11G014760 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD03G021590 MD11G014760 | 2 | ||
Manihot esculenta | Tree-based ortholog | 1-to-1 | ME07760G00030 | 1 | |
Anchor point | many-to-1 | ME06916G01990 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME07760G00030 | 1 | ||
Medicago truncatula | Tree-based ortholog | 1-to-many | MT5G032550 MT8G068950 | 2 | |
Anchor point | many-to-many | MT3G100710 MT8G068950 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT5G032550 | 1 | ||
Oryza sativa ssp. japonica | Tree-based ortholog | 1-to-many | OS08G37390 OS09G29100 | 2 | |
Anchor point | many-to-1 | OS09G29100 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS09G29100 | 1 | ||
Ostreococcus lucimarinus | Tree-based ortholog | 1-to-many | OL17G01620 OL01G06150 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL17G01620 | 1 | ||
Physcomitrella patens | Tree-based ortholog | 1-to-many | PP00024G00880 PP00359G00110 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00359G00110 PP00024G00880 | 2 | ||
Populus trichocarpa | Tree-based ortholog | 1-to-many | PT02G10350 PT05G15780 | 2 | |
Anchor point | many-to-many | PT02G10350 PT05G15780 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT02G10350 PT05G15780 | 2 | ||
Prunus persica | Tree-based ortholog | 1-to-1 | PPE_006G20360 | 1 | |
Anchor point | many-to-many | PPE_001G58740 PPE_006G20360 PPE_006G23860 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_006G20360 | 1 | ||
Ricinus communis | Tree-based ortholog | 1-to-1 | RC27749G00170 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC27749G00170 | 1 | ||
Solanum lycopersicum | Tree-based ortholog | 1-to-many | SL05G051410 SL11G010460 | 2 | |
Anchor point | many-to-many | SL11G010460 SL05G051410 SL04G076040 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL05G051410 | 1 | ||
Solanum tuberosum | Tree-based ortholog | 1-to-many | ST05G023820 ST11G009240 | 2 | |
Anchor point | many-to-many | ST04G029600 ST11G009240 ST12G025980 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST05G023820 | 1 | ||
Thellungiella parvula | Tree-based ortholog | 1-to-1 | TP2G28500 | 1 | |
Anchor point | many-to-many | TP6G33010 TP2G28500 TP4G01510 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP2G28500 | 1 | ||
Theobroma cacao | Tree-based ortholog | 1-to-1 | TC0001G08870 | 1 | |
Anchor point | many-to-many | TC0008G06590 TC0001G08870 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0001G08870 | 1 | ||
Vitis vinifera | Tree-based ortholog | 1-to-1 | VV00G06850 | 1 | |
Anchor point | many-to-many | VV18G04300 VV00G06850 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV00G06850 | 1 | ||
Zea mays | Tree-based ortholog | 1-to-many | ZM10G25140 ZM01G35510 ZM08G23320 ... | 6 | |
Anchor point | many-to-many | ZM07G16590 ZM04G27270 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ZM02G31970 ZM07G16590 | 2 |