Integrative Orthology Viewer: AT5G65340 (Arabidopsis thaliana)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Arabidopsis thaliana | Orthologous gene family | AT5G65340 | 1 | |
Tree-based ortholog | AT5G65340 | 1 | ||
Anchor point | AT2G22460 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | AT5G65340 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | 1-to-1 | ATR_05059G00010 | 1 | |
Tree-based ortholog | 1-to-1 | ATR_05059G00010 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_05059G00010 | 1 | ||
Arabidopsis lyrata | Orthologous gene family | 1-to-1 | AL8G32170 | 1 | |
Tree-based ortholog | 1-to-1 | AL8G32170 | 1 | ||
Anchor point | 1-to-many | AL8G32170 AL4G01910 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL8G32170 | 1 | ||
Beta vulgaris | Orthologous gene family | 1-to-1 | BV6G05290 | 1 | |
Tree-based ortholog | 1-to-1 | BV6G05290 | 1 | ||
Anchor point | 1-to-1 | BV6G05290 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV6G05290 | 1 | ||
Brassica rapa | Orthologous gene family | 1-to-many | BR02G41080 BR09G07190 | 2 | |
Tree-based ortholog | 1-to-1 | BR02G41080 | 1 | ||
Anchor point | 1-to-many | BR09G07190 BR02G41080 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | BR09G07190 BR02G41080 | 2 | ||
Capsella rubella | Orthologous gene family | 1-to-1 | CRU_008G25440 | 1 | |
Tree-based ortholog | 1-to-1 | CRU_008G25440 | 1 | ||
Anchor point | 1-to-many | CRU_008G25440 CRU_004G01530 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_008G25440 | 1 | ||
Carica papaya | Orthologous gene family | 1-to-1 | CP00055G00590 | 1 | |
Tree-based ortholog | 1-to-1 | CP00055G00590 | 1 | ||
Anchor point | 1-to-1 | CP00055G00590 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00055G00590 | 1 | ||
Citrullus lanatus | Orthologous gene family | 1-to-1 | CL01G18820 | 1 | |
Tree-based ortholog | 1-to-1 | CL04G07700 | 1 | ||
Anchor point | 1-to-1 | CL01G18820 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL01G18820 | 1 | ||
Citrus sinensis | Orthologous gene family | 1-to-1 | CS00059G00560 | 1 | |
Tree-based ortholog | 1-to-1 | CS00059G00560 | 1 | ||
Anchor point | 1-to-1 | CS00059G00560 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00059G00560 | 1 | ||
Cucumis melo | Orthologous gene family | 1-to-1 | CM00007G07620 | 1 | |
Tree-based ortholog | 1-to-1 | CM00007G07620 | 1 | ||
Anchor point | 1-to-1 | CM00007G07620 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00007G07620 | 1 | ||
Eucalyptus grandis | Tree-based ortholog | 1-to-1 | EG0002G22210 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0006G15810 | 1 | ||
Fragaria vesca | Orthologous gene family | 1-to-1 | FV0G21880 | 1 | |
Tree-based ortholog | 1-to-1 | FV0G21880 | 1 | ||
Anchor point | 1-to-1 | FV0G21880 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV0G21880 | 1 | ||
Glycine max | Orthologous gene family | 1-to-many | GM05G30890 GM08G14090 GM11G37870 ... | 4 | |
Tree-based ortholog | 1-to-many | GM18G01770 GM11G37870 GM05G30890 ... | 4 | ||
Anchor point | 1-to-many | GM05G30890 GM11G37870 GM18G01770 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM05G30890 GM08G14090 | 2 | ||
Gossypium raimondii | Orthologous gene family | 1-to-1 | GR07G23540 | 1 | |
Tree-based ortholog | 1-to-many | GR08G09130 GR07G23540 GR11G11070 | 3 | ||
Anchor point | 1-to-many | GR08G09130 GR11G11070 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR07G23540 | 1 | ||
Lotus japonicus | Tree-based ortholog | 1-to-1 | LJ2G019200 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ2G019200 | 1 | ||
Malus domestica | Orthologous gene family | 1-to-many | MD00G396210 MD00G512560 | 2 | |
Tree-based ortholog | 1-to-many | MD00G512560 MD00G396210 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD00G512560 MD00G396210 | 2 | ||
Manihot esculenta | Orthologous gene family | 1-to-1 | ME08265G01370 | 1 | |
Tree-based ortholog | 1-to-1 | ME08265G01370 | 1 | ||
Anchor point | 1-to-1 | ME08265G01370 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME08265G01370 | 1 | ||
Medicago truncatula | Orthologous gene family | 1-to-1 | MT3G086740 | 1 | |
Tree-based ortholog | 1-to-many | MT3G086740 MT8G089865 | 2 | ||
Anchor point | 1-to-many | MT8G089865 MT3G086740 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT3G086740 | 1 | ||
Oryza sativa ssp. japonica | Tree-based ortholog | 1-to-1 | OS05G20030 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS01G59200 | 1 | ||
Physcomitrella patens | Tree-based ortholog | 1-to-many | PP00324G00040 PP00020G00480 PP00003G01550 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00020G00480 PP00324G00040 PP00003G01550 | 3 | ||
Populus trichocarpa | Tree-based ortholog | 1-to-many | PT05G25930 PT02G00200 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT02G00200 PT05G25930 | 2 | ||
Prunus persica | Orthologous gene family | 1-to-1 | PPE_006G20170 | 1 | |
Tree-based ortholog | 1-to-1 | PPE_006G20170 | 1 | ||
Anchor point | 1-to-1 | PPE_006G20170 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_006G20170 | 1 | ||
Ricinus communis | Orthologous gene family | 1-to-1 | RC29810G00050 | 1 | |
Tree-based ortholog | 1-to-1 | RC29810G00050 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC30170G07600 | 1 | ||
Solanum lycopersicum | Orthologous gene family | 1-to-1 | SL11G010360 | 1 | |
Tree-based ortholog | 1-to-many | SL11G010360 SL05G051440 SL04G014230 | 3 | ||
Anchor point | 1-to-many | SL11G010360 SL05G051440 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL11G010360 | 1 | ||
Solanum tuberosum | Orthologous gene family | 1-to-1 | ST11G009340 | 1 | |
Tree-based ortholog | 1-to-many | ST11G009340 ST05G023890 ST04G011290 | 3 | ||
Anchor point | 1-to-many | ST11G009340 ST05G023890 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST11G009340 | 1 | ||
Thellungiella parvula | Tree-based ortholog | 1-to-1 | TP4G01470 | 1 | |
Anchor point | 1-to-1 | TP4G01470 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP4G01470 | 1 | ||
Theobroma cacao | Orthologous gene family | 1-to-1 | TC0001G09070 | 1 | |
Tree-based ortholog | 1-to-1 | TC0001G09070 | 1 | ||
Anchor point | 1-to-many | TC0001G09070 TC0001G10790 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0001G09070 | 1 | ||
Vitis vinifera | Orthologous gene family | 1-to-1 | VV00G19460 | 1 | |
Tree-based ortholog | 1-to-1 | VV00G19460 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV00G19460 | 1 | ||
Zea mays | Tree-based ortholog | 1-to-1 | ZM05G14810 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM08G33280 | 1 |