Integrative Orthology Viewer: AT5G62500 (Arabidopsis thaliana)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Arabidopsis thaliana | Orthologous gene family | AT3G47690 AT5G62500 | 2 | |
Tree-based ortholog | AT5G62500 | 1 | ||
Anchor point | AT3G47690 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | AT5G62500 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | many-to-1 | ATR_00010G03870 | 1 | |
Tree-based ortholog | 1-to-1 | ATR_00010G03870 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00010G03870 | 1 | ||
Arabidopsis lyrata | Orthologous gene family | many-to-many | AL5G16470 AL8G28900 | 2 | |
Tree-based ortholog | 1-to-1 | AL8G28900 | 1 | ||
Anchor point | 1-to-many | AL8G28900 AL5G16470 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL8G28900 | 1 | ||
Beta vulgaris | Orthologous gene family | many-to-1 | BV0G61020 | 1 | |
Tree-based ortholog | 1-to-1 | BV0G61020 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV0G61020 | 1 | ||
Brassica rapa | Orthologous gene family | many-to-1 | BR06G29030 | 1 | |
Tree-based ortholog | 1-to-many | BR06G29030 BR06G29040 BR02G38830 | 3 | ||
Anchor point | 1-to-many | BR02G38830 BR06G17630 BR06G29030 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR06G29030 | 1 | ||
Capsella rubella | Orthologous gene family | many-to-many | CRU_005G12950 CRU_008G22540 | 2 | |
Tree-based ortholog | 1-to-1 | CRU_008G22540 | 1 | ||
Anchor point | 1-to-many | CRU_008G22540 CRU_005G12950 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_008G22540 | 1 | ||
Carica papaya | Orthologous gene family | many-to-1 | CP00017G02030 | 1 | |
Tree-based ortholog | 1-to-1 | CP00017G02030 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00017G02030 | 1 | ||
Chlamydomonas reinhardtii | Tree-based ortholog | 1-to-1 | CR17G10160 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR17G10160 | 1 | ||
Citrullus lanatus | Orthologous gene family | many-to-1 | CL04G12210 | 1 | |
Tree-based ortholog | 1-to-1 | CL04G12210 | 1 | ||
Anchor point | 1-to-1 | CL04G12210 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL04G12210 | 1 | ||
Citrus sinensis | Orthologous gene family | many-to-1 | CS00009G00510 | 1 | |
Tree-based ortholog | 1-to-1 | CS00009G00510 | 1 | ||
Anchor point | 1-to-1 | CS00009G00510 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00009G00510 | 1 | ||
Cucumis melo | Orthologous gene family | many-to-1 | CM00001G00590 | 1 | |
Tree-based ortholog | 1-to-1 | CM00001G00590 | 1 | ||
Anchor point | 1-to-1 | CM00001G00590 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00001G00590 | 1 | ||
Eucalyptus grandis | Orthologous gene family | many-to-1 | EG0002G03990 | 1 | |
Tree-based ortholog | 1-to-1 | EG0002G03990 | 1 | ||
Anchor point | 1-to-1 | EG0002G03990 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0002G03990 | 1 | ||
Fragaria vesca | Orthologous gene family | many-to-1 | FV5G13560 | 1 | |
Tree-based ortholog | 1-to-1 | FV5G13560 | 1 | ||
Anchor point | 1-to-1 | FV5G13560 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV5G13560 | 1 | ||
Glycine max | Orthologous gene family | many-to-many | GM06G20550 GM17G10720 | 2 | |
Tree-based ortholog | 1-to-many | GM17G10720 GM04G33890 GM06G20550 | 3 | ||
Anchor point | 1-to-many | GM06G20550 GM17G10720 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GM17G10720 | 1 | ||
Gossypium raimondii | Orthologous gene family | many-to-1 | GR03G09570 | 1 | |
Tree-based ortholog | 1-to-1 | GR03G09570 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR03G09570 | 1 | ||
Lotus japonicus | Orthologous gene family | many-to-1 | LJ5G028320 | 1 | |
Tree-based ortholog | 1-to-1 | LJ5G028320 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ5G028320 | 1 | ||
Malus domestica | Orthologous gene family | many-to-1 | MD14G018950 | 1 | |
Tree-based ortholog | 1-to-many | MD00G292850 MD06G015570 MD00G478570 ... | 5 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD14G018950 | 1 | ||
Manihot esculenta | Orthologous gene family | many-to-many | ME08359G02460 ME12794G01980 | 2 | |
Tree-based ortholog | 1-to-many | ME08359G02460 ME12794G01980 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME08359G02460 | 1 | ||
Medicago truncatula | Orthologous gene family | many-to-many | MT00G38760 MT4G108330 | 2 | |
Tree-based ortholog | 1-to-1 | MT00G11770 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT00G38760 | 1 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-1 | OS04G54940 | 1 | |
Tree-based ortholog | 1-to-1 | OS04G54940 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS04G54940 | 1 | ||
Ostreococcus lucimarinus | Tree-based ortholog | 1-to-1 | OL14G03000 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL14G03000 | 1 | ||
Physcomitrella patens | Tree-based ortholog | 1-to-many | PP00049G00550 PP00049G00600 PP00009G01100 ... | 4 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00009G01100 PP00049G00600 PP00009G00740 ... | 4 | ||
Populus trichocarpa | Orthologous gene family | many-to-many | PT12G06940 PT15G06290 | 2 | |
Tree-based ortholog | 1-to-many | PT15G06290 PT12G06940 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT12G06940 PT15G06290 | 2 | ||
Prunus persica | Orthologous gene family | many-to-1 | PPE_005G19510 | 1 | |
Tree-based ortholog | 1-to-1 | PPE_005G19510 | 1 | ||
Anchor point | 1-to-1 | PPE_005G19510 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_005G19510 | 1 | ||
Ricinus communis | Orthologous gene family | many-to-1 | RC30147G07810 | 1 | |
Tree-based ortholog | 1-to-1 | RC30147G07810 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC30147G07810 | 1 | ||
Solanum lycopersicum | Orthologous gene family | many-to-1 | SL03G116370 | 1 | |
Tree-based ortholog | 1-to-1 | SL03G116370 | 1 | ||
Anchor point | 1-to-1 | SL03G116370 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL03G116370 | 1 | ||
Solanum tuberosum | Orthologous gene family | many-to-1 | ST03G029830 | 1 | |
Tree-based ortholog | 1-to-1 | ST03G029830 | 1 | ||
Anchor point | 1-to-1 | ST03G029830 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST03G029830 | 1 | ||
Thellungiella parvula | Orthologous gene family | many-to-many | TP2G25680 TP5G14240 | 2 | |
Tree-based ortholog | 1-to-1 | TP2G25680 | 1 | ||
Anchor point | 1-to-many | TP5G14240 TP2G25680 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP2G25680 | 1 | ||
Theobroma cacao | Orthologous gene family | many-to-1 | TC0003G08650 | 1 | |
Tree-based ortholog | 1-to-1 | TC0003G08650 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0003G08650 | 1 | ||
Vitis vinifera | Orthologous gene family | many-to-1 | VV01G12330 | 1 | |
Tree-based ortholog | 1-to-1 | VV01G12330 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV01G12330 | 1 | ||
Zea mays | Orthologous gene family | many-to-1 | ZM02G02820 | 1 | |
Tree-based ortholog | 1-to-1 | ZM02G02820 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM02G02820 | 1 |