Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
AT5G50320
(Arabidopsis thaliana)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Arabidopsis thaliana | Orthologous gene family | AT5G50320 | 1 |  |
| Tree-based ortholog | AT5G50320 | 1 | ||
| Anchor point | AT5G63290 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | AT5G50320 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Tree-based ortholog | 1-to-1 | ATR_00049G00640 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00049G00640 | 1 | ||
| Arabidopsis lyrata | Tree-based ortholog | 1-to-1 | AL8G14310 | 1 | |
| Anchor point | 1-to-many | AL8G29880 AL8G14310 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL8G14310 | 1 | ||
| Beta vulgaris | Tree-based ortholog | 1-to-1 | BV0G13090 | 1 | |
| Anchor point | 1-to-1 | BV0G13090 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV0G13090 | 1 | ||
| Brassica rapa | Tree-based ortholog | 1-to-1 | BR03G24670 | 1 | |
| Anchor point | 1-to-1 | BR03G24670 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR03G24670 | 1 | ||
| Capsella rubella | Tree-based ortholog | 1-to-1 | CRU_008G10160 | 1 | |
| Anchor point | 1-to-many | CRU_008G23380 CRU_008G10160 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_008G10160 | 1 | ||
| Carica papaya | Tree-based ortholog | 1-to-1 | CP00004G00680 | 1 | |
| Anchor point | 1-to-1 | CP00004G00680 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00004G00680 | 1 | ||
| Chlamydomonas reinhardtii | Tree-based ortholog | 1-to-1 | CR07G09850 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR07G09850 | 1 | ||
| Citrullus lanatus | Tree-based ortholog | 1-to-1 | CL06G18160 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL06G18160 | 1 | ||
| Citrus sinensis | Tree-based ortholog | 1-to-1 | CS00020G00150 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00020G00150 | 1 | ||
| Cucumis melo | Tree-based ortholog | 1-to-1 | CM00089G00890 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00089G00890 | 1 | ||
| Eucalyptus grandis | Tree-based ortholog | 1-to-many | EG0002G01190 EG0184G00040 | 2 | |
| Anchor point | 1-to-1 | EG0002G01190 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0002G01190 | 1 | ||
| Fragaria vesca | Tree-based ortholog | 1-to-1 | FV5G09700 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV5G09700 | 1 | ||
| Glycine max | Tree-based ortholog | 1-to-many | GM04G36790 GM06G18150 | 2 | |
| Anchor point | 1-to-many | GM04G36780 GM06G18150 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM06G18150 GM04G36790 | 2 | ||
| Gossypium raimondii | Tree-based ortholog | 1-to-1 | GR07G04180 | 1 | |
| Anchor point | 1-to-many | GR06G27030 GR01G06150 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR07G04180 | 1 | ||
| Malus domestica | Tree-based ortholog | 1-to-1 | MD00G329870 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD06G013040 | 1 | ||
| Manihot esculenta | Tree-based ortholog | 1-to-1 | ME12794G00060 | 1 | |
| Anchor point | 1-to-1 | ME12794G00060 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME12794G00060 | 1 | ||
| Medicago truncatula | Tree-based ortholog | 1-to-1 | MT1G107255 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT1G107255 | 1 | ||
| Oryza sativa ssp. japonica | Tree-based ortholog | 1-to-1 | OS04G40840 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS04G40840 | 1 | ||
| Ostreococcus lucimarinus | Tree-based ortholog | 1-to-1 | OL14G00420 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL14G00420 | 1 | ||
| Physcomitrella patens | Tree-based ortholog | 1-to-many | PP00185G00180 PP00167G00230 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PP00185G00180 | 1 | ||
| Populus trichocarpa | Tree-based ortholog | 1-to-many | PT15G09050 PT12G09280 | 2 | |
| Anchor point | 1-to-1 | PT15G09040 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT15G09050 | 1 | ||
| Prunus persica | Tree-based ortholog | 1-to-1 | PPE_005G16390 | 1 | |
| Anchor point | 1-to-1 | PPE_005G16390 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_005G16390 | 1 | ||
| Ricinus communis | Tree-based ortholog | 1-to-1 | RC30147G04760 | 1 | |
| Anchor point | 1-to-1 | RC30147G04760 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC30147G04760 | 1 | ||
| Solanum lycopersicum | Tree-based ortholog | 1-to-1 | SL03G110910 | 1 | |
| Anchor point | 1-to-1 | SL03G110910 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL03G110910 | 1 | ||
| Solanum tuberosum | Tree-based ortholog | 1-to-1 | ST03G024180 | 1 | |
| Anchor point | 1-to-1 | ST03G024180 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST03G024180 | 1 | ||
| Thellungiella parvula | Tree-based ortholog | 1-to-1 | TP6G12400 | 1 | |
| Anchor point | 1-to-many | TP6G12400 TP2G26410 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP6G12400 | 1 | ||
| Theobroma cacao | Tree-based ortholog | 1-to-1 | TC0003G12590 | 1 | |
| Anchor point | 1-to-1 | TC0003G12580 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0003G12590 | 1 | ||
| Vitis vinifera | Tree-based ortholog | 1-to-1 | VV17G00140 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV17G00140 | 1 | ||
| Zea mays | Tree-based ortholog | 1-to-many | ZM10G19050 ZM02G12010 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ZM10G19050 ZM02G12010 | 2 |