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Integrative Orthology Viewer:
AT5G49890
(Arabidopsis thaliana)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Arabidopsis thaliana | Orthologous gene family | AT3G27170 AT5G26240 AT5G33280 ... | 5 |  |
| Tree-based ortholog | AT5G49890 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | AT5G49890 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | many-to-many | ATR_00013G01830 ATR_00033G01760 ATR_00099G00570 ... | 4 | |
| Tree-based ortholog | 1-to-many | ATR_00103G00460 ATR_00033G01760 ATR_00080G00780 ... | 4 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00099G00570 | 1 | ||
| Arabidopsis lyrata | Orthologous gene family | many-to-many | AL5G05980 AL6G26550 AL7G31960 ... | 5 | |
| Tree-based ortholog | 1-to-1 | AL8G13750 | 1 | ||
| Anchor point | N/A | AL8G13750 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL8G13750 | 1 | ||
| Beta vulgaris | Orthologous gene family | many-to-many | BV0G07430 BV2G13710 BV4G07230 ... | 6 | |
| Tree-based ortholog | 1-to-1 | BV4G07230 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV4G07230 | 1 | ||
| Brassica rapa | Orthologous gene family | many-to-many | BR02G00930 BR02G17230 BR02G32740 ... | 8 | |
| Tree-based ortholog | 1-to-many | BR02G17230 BR03G24440 | 2 | ||
| Anchor point | N/A | BR02G17230 BR03G24440 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | BR02G17230 BR03G24440 | 2 | ||
| Capsella rubella | Orthologous gene family | many-to-many | CRU_005G05010 CRU_006G23350 CRU_007G29490 ... | 5 | |
| Tree-based ortholog | 1-to-1 | CRU_008G09580 | 1 | ||
| Anchor point | N/A | CRU_008G09580 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_008G09580 | 1 | ||
| Carica papaya | Orthologous gene family | many-to-many | CP00046G00570 CP00058G01220 CP00171G00300 ... | 5 | |
| Tree-based ortholog | 1-to-1 | CP00248G00020 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP29844G00010 | 1 | ||
| Chlamydomonas reinhardtii | Orthologous gene family | many-to-many | CR01G08390 CR13G02830 | 2 | |
| Tree-based ortholog | 1-to-many | CR17G07340 CR09G01330 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR01G08390 | 1 | ||
| Citrullus lanatus | Orthologous gene family | many-to-many | CL06G05830 CL07G05960 CL11G00330 ... | 4 | |
| Tree-based ortholog | 1-to-many | CL11G00330 CL06G05830 CL07G05960 ... | 4 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL07G05960 | 1 | ||
| Citrus sinensis | Orthologous gene family | many-to-many | CS00011G01100 CS00013G00500 CS00514G00060 ... | 4 | |
| Tree-based ortholog | 1-to-many | CS00514G00060 CS00011G01100 CS00013G00500 ... | 4 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00589G00030 | 1 | ||
| Cucumis melo | Orthologous gene family | many-to-many | CM00003G05990 CM00008G01390 CM00022G03130 ... | 4 | |
| Tree-based ortholog | 1-to-many | CM00008G01390 CM00028G00670 CM00022G03130 ... | 4 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00028G00670 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | many-to-many | EG0003G33680 EG0003G33810 EG0003G33850 ... | 10 | |
| Tree-based ortholog | 1-to-many | EG0009G13770 EG0008G40950 EG0006G11960 ... | 11 | ||
| Anchor point | N/A | EG0009G23610 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0009G23610 | 1 | ||
| Fragaria vesca | Orthologous gene family | many-to-many | FV1G04680 FV1G29810 FV4G14690 ... | 4 | |
| Tree-based ortholog | 1-to-many | FV6G37340 FV1G04680 FV4G14690 ... | 4 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV1G29810 | 1 | ||
| Glycine max | Orthologous gene family | many-to-many | GM01G44950 GM05G14760 GM09G28620 ... | 8 | |
| Tree-based ortholog | 1-to-many | GM13G23080 GM11G00690 GM01G44950 ... | 7 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM16G33351 GM09G28620 | 2 | ||
| Gossypium raimondii | Orthologous gene family | many-to-many | GR01G27020 GR02G02400 GR07G06750 ... | 8 | |
| Tree-based ortholog | 1-to-1 | GR08G00120 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GR08G00120 GR07G06750 | 2 | ||
| Lotus japonicus | Orthologous gene family | many-to-many | LJ1G050400 LJ4G000250 LJ4G032300 ... | 4 | |
| Tree-based ortholog | 1-to-many | LJ4G032300 LJ4G000250 LJ1G050400 ... | 4 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ4G000250 | 1 | ||
| Malus domestica | Orthologous gene family | many-to-many | MD00G178870 MD00G186650 MD00G457530 ... | 9 | |
| Tree-based ortholog | 1-to-1 | MD00G001900 | 1 | ||
| Anchor point | N/A | MD08G022750 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD00G186650 | 1 | ||
| Manihot esculenta | Orthologous gene family | many-to-many | ME00325G00530 ME01551G02300 ME05005G00210 ... | 6 | |
| Tree-based ortholog | 1-to-many | ME00325G00530 ME12793G00020 ME06028G00280 ... | 6 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME09809G00110 | 1 | ||
| Medicago truncatula | Orthologous gene family | many-to-many | MT2G005410 MT4G115640 MT4G134730 ... | 7 | |
| Tree-based ortholog | 1-to-many | MT6G023770 MT4G115640 MT5G009580 ... | 7 | ||
| Anchor point | N/A | MT4G134730 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT2G005410 | 1 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS01G65500 OS02G35190 OS03G48940 ... | 6 | |
| Tree-based ortholog | 1-to-many | OS08G20570 OS12G25200 OS03G48940 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS02G35190 | 1 | ||
| Ostreococcus lucimarinus | Orthologous gene family | many-to-1 | OL09G03450 | 1 | |
| Tree-based ortholog | 1-to-many | OL03G05750 OL09G03450 OL02G05500 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL09G03450 | 1 | ||
| Physcomitrella patens | Orthologous gene family | many-to-many | PP00022G01670 PP00137G00570 PP00331G00150 | 3 | |
| Tree-based ortholog | 1-to-many | PP00213G00090 PP00155G00460 PP00348G00110 ... | 6 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PP00022G01670 | 1 | ||
| Populus trichocarpa | Orthologous gene family | many-to-many | PT00G05460 PT01G33170 PT03G00150 ... | 9 | |
| Tree-based ortholog | 1-to-many | PT03G00150 PT03G00230 PT08G15060 ... | 10 | ||
| Anchor point | N/A | PT04G22830 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT03G00150 PT04G22830 | 2 | ||
| Prunus persica | Orthologous gene family | many-to-many | PPE_001G14920 PPE_001G53260 PPE_003G28150 ... | 5 | |
| Tree-based ortholog | 1-to-1 | PPE_001G53260 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_001G53260 | 1 | ||
| Ricinus communis | Orthologous gene family | many-to-many | RC27394G00190 RC29609G00370 RC29844G02100 ... | 4 | |
| Tree-based ortholog | 1-to-1 | RC29609G00370 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29609G00370 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | many-to-many | SL01G103140 SL02G068080 SL02G094060 ... | 6 | |
| Tree-based ortholog | 1-to-many | SL02G068080 SL09G075800 SL01G103140 ... | 4 | ||
| Anchor point | N/A | SL01G103140 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL10G044470 | 1 | ||
| Solanum tuberosum | Orthologous gene family | many-to-many | ST01G040130 ST02G014150 ST02G037250 ... | 6 | |
| Tree-based ortholog | 1-to-many | ST02G014150 ST09G023340 ST01G040130 ... | 4 | ||
| Anchor point | N/A | ST01G040130 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST10G011350 | 1 | ||
| Thellungiella parvula | Orthologous gene family | many-to-many | TP2G16280 TP2G16290 TP2G21510 ... | 6 | |
| Tree-based ortholog | 1-to-1 | TP6G11370 | 1 | ||
| Anchor point | N/A | TP6G11370 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP6G11370 | 1 | ||
| Theobroma cacao | Orthologous gene family | many-to-many | TC0001G14050 TC0004G03360 TC0004G23070 ... | 4 | |
| Tree-based ortholog | 1-to-many | TC0004G03360 TC0004G23070 TC0009G12920 ... | 4 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0001G14050 | 1 | ||
| Vitis vinifera | Orthologous gene family | many-to-many | VV05G04580 VV07G01300 VV11G01180 ... | 5 | |
| Tree-based ortholog | 1-to-1 | VV12G06530 | 1 | ||
| Anchor point | N/A | VV12G06530 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV12G06530 | 1 | ||
| Zea mays | Orthologous gene family | many-to-many | ZM02G02670 ZM03G25320 ZM05G22410 ... | 6 | |
| Tree-based ortholog | 1-to-many | ZM05G22410 ZM09G16600 ZM01G49500 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM10G17190 | 1 |