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Integrative Orthology Viewer:
AT5G49230
(Arabidopsis thaliana)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Arabidopsis thaliana | Orthologous gene family | AT5G49230 | 1 |  |
| Tree-based ortholog | AT5G49230 | 1 | ||
| Anchor point | AT3G06760 AT1G02750 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | AT5G49230 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Tree-based ortholog | 1-to-1 | ATR_00057G00880 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00057G00880 | 1 | ||
| Arabidopsis lyrata | Orthologous gene family | 1-to-1 | AL8G12920 | 1 | |
| Tree-based ortholog | 1-to-1 | AL8G12920 | 1 | ||
| Anchor point | many-to-many | AL3G07070 AL1G01960 AL8G12920 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL8G12920 | 1 | ||
| Beta vulgaris | Tree-based ortholog | 1-to-1 | BV3G08640 | 1 | |
| Anchor point | many-to-1 | BV3G08640 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV4G05890 | 1 | ||
| Brassica rapa | Orthologous gene family | 1-to-1 | BR09G04840 | 1 | |
| Tree-based ortholog | 1-to-1 | BR09G04840 | 1 | ||
| Anchor point | many-to-many | BR09G04840 BR05G34330 BR09G54290 ... | 5 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR09G04840 | 1 | ||
| Capsella rubella | Orthologous gene family | 1-to-1 | CRU_008G08910 | 1 | |
| Tree-based ortholog | 1-to-1 | CRU_008G08910 | 1 | ||
| Anchor point | many-to-many | CRU_001G01690 CRU_008G08910 CRU_003G06040 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_008G08910 | 1 | ||
| Carica papaya | Tree-based ortholog | 1-to-1 | CP00009G01010 | 1 | |
| Anchor point | many-to-many | CP00151G00440 CP00009G01010 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00009G01010 | 1 | ||
| Citrullus lanatus | Tree-based ortholog | 1-to-1 | CL06G04570 | 1 | |
| Anchor point | many-to-1 | CL06G04570 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL03G17190 | 1 | ||
| Citrus sinensis | Tree-based ortholog | 1-to-1 | CS00016G00930 | 1 | |
| Anchor point | many-to-many | CS00001G07050 CS00016G00930 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00016G00930 | 1 | ||
| Cucumis melo | Tree-based ortholog | 1-to-1 | CM00047G01650 | 1 | |
| Anchor point | many-to-many | CM00047G01650 CM00026G02790 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00025G00540 | 1 | ||
| Eucalyptus grandis | Tree-based ortholog | 1-to-many | EG0002G16370 EG0008G26460 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0002G16370 | 1 | ||
| Fragaria vesca | Tree-based ortholog | 1-to-1 | FV3G39960 | 1 | |
| Anchor point | many-to-1 | FV3G39960 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV3G39960 | 1 | ||
| Glycine max | Tree-based ortholog | 1-to-many | GM16G17711 GM20G23801 GM09G04490 ... | 4 | |
| Anchor point | many-to-many | GM09G04490 GM15G15560 GM19G40150 ... | 4 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM09G04490 GM15G15560 | 2 | ||
| Gossypium raimondii | Tree-based ortholog | 1-to-many | GR06G25980 GR05G06510 | 2 | |
| Anchor point | many-to-many | GR07G12600 GR06G25980 GR05G06510 ... | 4 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GR06G25980 GR05G06510 | 2 | ||
| Malus domestica | Tree-based ortholog | 1-to-many | MD00G183640 MD00G223490 MD11G011050 ... | 9 | |
| Anchor point | many-to-1 | MD13G014510 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD13G014510 | 1 | ||
| Manihot esculenta | Tree-based ortholog | 1-to-many | ME01945G00400 ME01551G04070 | 2 | |
| Anchor point | many-to-many | ME01945G00400 ME01551G04070 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME01945G00400 | 1 | ||
| Medicago truncatula | Tree-based ortholog | 1-to-1 | MT2G035070 | 1 | |
| Anchor point | many-to-many | MT1G083780 MT7G109145 MT2G035070 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT1G083780 | 1 | ||
| Oryza sativa ssp. japonica | Tree-based ortholog | 1-to-1 | OS05G28980 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS05G28980 | 1 | ||
| Physcomitrella patens | Tree-based ortholog | 1-to-many | PP00243G00120 PP00111G00560 PP00034G00160 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00034G00160 PP00111G00560 PP00243G00120 | 3 | ||
| Populus trichocarpa | Tree-based ortholog | 1-to-many | PT00G05520 PT19G02730 PT01G07180 ... | 5 | |
| Anchor point | many-to-many | PT02G20050 PT10G00080 PT14G12550 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT08G21340 PT10G00080 | 2 | ||
| Prunus persica | Tree-based ortholog | 1-to-1 | PPE_001G11880 | 1 | |
| Anchor point | many-to-1 | PPE_001G11880 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_001G11880 | 1 | ||
| Ricinus communis | Tree-based ortholog | 1-to-1 | RC29889G00090 | 1 | |
| Anchor point | many-to-1 | RC29889G00090 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC30128G02680 | 1 | ||
| Solanum lycopersicum | Tree-based ortholog | 1-to-many | SL01G065550 SL12G099390 | 2 | |
| Anchor point | many-to-many | SL01G065550 SL12G099390 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL01G065550 | 1 | ||
| Solanum tuberosum | Tree-based ortholog | 1-to-many | ST01G010730 ST12G031340 | 2 | |
| Anchor point | many-to-many | ST09G023050 ST12G031340 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST01G010730 | 1 | ||
| Thellungiella parvula | Orthologous gene family | 1-to-1 | TP2G19610 | 1 | |
| Tree-based ortholog | 1-to-1 | TP2G19610 | 1 | ||
| Anchor point | many-to-many | TP2G19610 TP3G05730 TP1G01730 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP2G19610 | 1 | ||
| Theobroma cacao | Tree-based ortholog | 1-to-1 | TC0004G29440 | 1 | |
| Anchor point | many-to-1 | TC0004G29440 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0004G29440 | 1 | ||
| Vitis vinifera | Tree-based ortholog | 1-to-1 | VV14G09270 | 1 | |
| Anchor point | many-to-many | VV05G12050 VV07G08850 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV14G09270 | 1 | ||
| Zea mays | Tree-based ortholog | 1-to-1 | ZM06G22410 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM06G22410 | 1 |