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Integrative Orthology Viewer:
AT5G49160
(Arabidopsis thaliana)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Arabidopsis thaliana | Orthologous gene family | AT4G08990 AT4G13610 AT4G14140 ... | 4 |  |
| Tree-based ortholog | AT5G49160 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | AT5G49160 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Tree-based ortholog | 1-to-many | ATR_00040G02460 ATR_00040G02510 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00017G02670 | 1 | ||
| Arabidopsis lyrata | Orthologous gene family | many-to-many | AL7G30460 AL8G12720 | 2 | |
| Tree-based ortholog | 1-to-1 | AL8G12720 | 1 | ||
| Anchor point | N/A | AL8G12720 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL8G12720 | 1 | ||
| Beta vulgaris | Orthologous gene family | many-to-1 | BV8G06420 | 1 | |
| Tree-based ortholog | 1-to-1 | BV8G06420 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV8G06420 | 1 | ||
| Brassica rapa | Orthologous gene family | many-to-many | BR06G28390 BR09G43960 | 2 | |
| Tree-based ortholog | 1-to-many | BR04G13010 BR09G43960 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR09G43960 | 1 | ||
| Capsella rubella | Orthologous gene family | many-to-many | CRU_004G03790 CRU_007G27730 CRU_008G08840 | 3 | |
| Tree-based ortholog | 1-to-many | CRU_007G27730 CRU_008G08840 | 2 | ||
| Anchor point | N/A | CRU_008G08840 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_008G08840 | 1 | ||
| Carica papaya | Tree-based ortholog | 1-to-1 | CP00037G01870 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00037G01870 | 1 | ||
| Chlamydomonas reinhardtii | Orthologous gene family | many-to-1 | CR10G09540 | 1 | |
| Tree-based ortholog | 1-to-1 | CR10G09540 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR10G09540 | 1 | ||
| Citrullus lanatus | Orthologous gene family | many-to-1 | CL11G18490 | 1 | |
| Tree-based ortholog | 1-to-1 | CL11G18490 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL11G18490 | 1 | ||
| Citrus sinensis | Orthologous gene family | many-to-1 | CS00074G00770 | 1 | |
| Tree-based ortholog | 1-to-many | CS00639G00030 CS00074G00770 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00074G00770 | 1 | ||
| Cucumis melo | Tree-based ortholog | 1-to-1 | CM00094G00040 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00094G00040 | 1 | ||
| Eucalyptus grandis | Tree-based ortholog | 1-to-many | EG0009G00310 EG0009G00680 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0009G00310 | 1 | ||
| Fragaria vesca | Tree-based ortholog | 1-to-1 | FV2G49550 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV1G12070 | 1 | ||
| Glycine max | Orthologous gene family | many-to-many | GM04G36150 GM06G18790 | 2 | |
| Tree-based ortholog | 1-to-many | GM06G18790 GM04G36150 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM04G36150 GM06G18790 | 2 | ||
| Gossypium raimondii | Orthologous gene family | many-to-1 | GR12G04800 | 1 | |
| Tree-based ortholog | 1-to-1 | GR12G04800 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR12G04800 | 1 | ||
| Lotus japonicus | Orthologous gene family | many-to-1 | LJ3G015630 | 1 | |
| Tree-based ortholog | 1-to-1 | LJ3G015630 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ3G015630 | 1 | ||
| Malus domestica | Tree-based ortholog | 1-to-1 | MD06G002270 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD00G132150 MD00G345000 | 2 | ||
| Manihot esculenta | Tree-based ortholog | 1-to-many | ME07171G00180 ME00853G00280 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ME07171G00180 ME00853G00280 | 2 | ||
| Medicago truncatula | Orthologous gene family | many-to-many | MT2G046020 MT6G065580 | 2 | |
| Tree-based ortholog | 1-to-1 | MT3G026200 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MT6G065580 MT2G046020 | 2 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS03G58400 OS07G08500 | 2 | |
| Tree-based ortholog | 1-to-many | OS03G58400 OS07G08500 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS03G58400 | 1 | ||
| Physcomitrella patens | Tree-based ortholog | 1-to-1 | PP00031G02080 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PP00031G02080 | 1 | ||
| Populus trichocarpa | Orthologous gene family | many-to-many | PT00G05450 PT04G13400 PT18G13800 | 3 | |
| Tree-based ortholog | 1-to-many | PT18G13800 PT00G05450 PT04G13400 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT04G13400 PT00G05450 PT18G13800 | 3 | ||
| Prunus persica | Tree-based ortholog | 1-to-many | PPE_007G20350 PPE_007G07440 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_007G20350 | 1 | ||
| Ricinus communis | Tree-based ortholog | 1-to-many | RC29983G02030 RC29609G00330 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29983G02030 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | many-to-1 | SL11G030600 | 1 | |
| Tree-based ortholog | 1-to-1 | SL11G030600 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL11G030600 | 1 | ||
| Solanum tuberosum | Orthologous gene family | many-to-many | ST04G017550 ST11G017990 | 2 | |
| Tree-based ortholog | 1-to-many | ST11G017990 ST04G017550 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST11G017990 | 1 | ||
| Thellungiella parvula | Orthologous gene family | many-to-many | TP2G19890 TP4G01970 | 2 | |
| Tree-based ortholog | 1-to-1 | TP4G01970 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP4G01970 | 1 | ||
| Theobroma cacao | Orthologous gene family | many-to-1 | TC0001G14060 | 1 | |
| Tree-based ortholog | 1-to-1 | TC0001G14060 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0001G14060 | 1 | ||
| Vitis vinifera | Orthologous gene family | many-to-many | VV07G01280 VV12G06490 | 2 | |
| Tree-based ortholog | 1-to-many | VV07G01290 VV07G01280 VV12G06490 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | VV07G01290 VV07G01280 | 2 | ||
| Zea mays | Orthologous gene family | many-to-many | ZM07G03230 ZM07G03250 | 2 | |
| Tree-based ortholog | 1-to-many | ZM07G03230 ZM07G03250 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ZM07G03230 ZM07G03250 | 2 |