Integrative Orthology Viewer: AT5G48670 (Arabidopsis thaliana)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Arabidopsis thaliana | Orthologous gene family | AT5G48670 | 1 | |
Tree-based ortholog | AT5G48670 AT5G27810 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | AT5G48670 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Tree-based ortholog | many-to-many | ATR_00176G00190 ATR_00095G01480 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00095G01480 | 1 | ||
Arabidopsis lyrata | Orthologous gene family | 1-to-1 | AL3G05840 | 1 | |
Tree-based ortholog | many-to-1 | AL3G05840 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL2G13530 | 1 | ||
Beta vulgaris | Tree-based ortholog | many-to-1 | BV4G09940 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV4G09940 | 1 | ||
Brassica rapa | Orthologous gene family | 1-to-many | BR05G15040 BR09G24520 | 2 | |
Tree-based ortholog | many-to-many | BR09G24520 BR05G15040 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | BR09G24520 BR05G15040 | 2 | ||
Capsella rubella | Orthologous gene family | 1-to-1 | CRU_003G05050 | 1 | |
Tree-based ortholog | many-to-1 | CRU_003G05050 | 1 | ||
Anchor point | N/A | CRU_007G28260 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_003G05050 | 1 | ||
Carica papaya | Orthologous gene family | 1-to-many | CP00265G00040 CP00265G00080 CP00358G00020 ... | 7 | |
Tree-based ortholog | many-to-many | CP00139G00400 CP01256G00010 CP33457G00020 ... | 60 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | CP28448G00010 CP24608G00010 CP00139G00400 ... | 12 | ||
Citrullus lanatus | Tree-based ortholog | many-to-1 | CL01G13780 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL03G17550 | 1 | ||
Citrus sinensis | Tree-based ortholog | many-to-1 | CS00105G00050 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00105G00050 | 1 | ||
Cucumis melo | Tree-based ortholog | many-to-1 | CM00049G00300 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00025G00150 | 1 | ||
Eucalyptus grandis | Tree-based ortholog | many-to-many | EG0005G14170 EG0005G14150 EG0005G14160 ... | 4 | |
Anchor point | N/A | EG0008G00400 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | EG0005G14170 EG0005G14180 EG0005G14160 ... | 4 | ||
Fragaria vesca | Tree-based ortholog | many-to-many | FV6G03720 FV6G03630 FV1G16270 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | FV1G16270 FV6G03720 FV6G03630 | 3 | ||
Glycine max | Tree-based ortholog | many-to-many | GM18G04760 GM11G33460 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM11G33460 GM18G04760 | 2 | ||
Gossypium raimondii | Tree-based ortholog | many-to-many | GR04G29200 GR13G21060 GR13G21030 ... | 7 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GR04G05470 GR04G22970 GR04G29200 | 3 | ||
Lotus japonicus | Tree-based ortholog | many-to-many | LJ5G001090 LJ1G046200 LJ6G006320 ... | 6 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ6G003030 | 1 | ||
Malus domestica | Tree-based ortholog | many-to-many | MD00G101690 MD00G185930 MD00G063130 ... | 4 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD15G030580 MD08G018940 | 2 | ||
Manihot esculenta | Tree-based ortholog | many-to-many | ME02264G00760 ME10305G00750 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME10305G00750 | 1 | ||
Medicago truncatula | Tree-based ortholog | many-to-many | MT4G084780 MT3G065100 | 2 | |
Anchor point | N/A | MT7G055940 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT3G065100 | 1 | ||
Oryza sativa ssp. japonica | Orthologous gene family | 1-to-1 | OS01G18440 | 1 | |
Tree-based ortholog | many-to-many | OS01G67890 OS01G18420 OS04G25930 ... | 12 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS01G18440 | 1 | ||
Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL01G05290 | 1 | |
Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00008G00510 PP00273G00200 PP00090G00610 ... | 10 | |
Populus trichocarpa | Tree-based ortholog | many-to-many | PT05G00240 PT13G00170 PT13G01810 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT13G00170 PT05G00240 | 2 | ||
Prunus persica | Tree-based ortholog | many-to-1 | PPE_002G11260 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PPE_001G58170 PPE_006G30990 PPE_006G30980 | 3 | ||
Ricinus communis | Tree-based ortholog | many-to-many | RC30199G00030 RC30128G03720 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC30199G00030 | 1 | ||
Solanum lycopersicum | Tree-based ortholog | many-to-1 | SL01G102260 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL01G102260 | 1 | ||
Solanum tuberosum | Tree-based ortholog | many-to-1 | ST01G039140 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST01G039140 | 1 | ||
Thellungiella parvula | Orthologous gene family | 1-to-1 | TP3G04750 | 1 | |
Tree-based ortholog | many-to-many | TP6G04880 TP6G04860 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP3G04750 | 1 | ||
Theobroma cacao | Orthologous gene family | 1-to-many | TC0005G22990 TC0005G23000 TC0005G32700 ... | 6 | |
Tree-based ortholog | many-to-many | TC0005G22990 TC0005G23000 TC0005G23020 ... | 8 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | TC0005G32720 TC0010G04250 TC0005G22990 ... | 6 | ||
Vitis vinifera | Tree-based ortholog | many-to-1 | VV14G10360 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV14G10360 | 1 | ||
Zea mays | Tree-based ortholog | many-to-many | ZM04G02630 ZM05G08350 ZM05G30410 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ZM05G30410 ZM05G08350 | 2 |