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Integrative Orthology Viewer:
AT5G48230
(Arabidopsis thaliana)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Arabidopsis thaliana | Orthologous gene family | AT5G47720 AT5G48230 | 2 |  |
| Tree-based ortholog | AT5G48230 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | AT5G48230 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | many-to-1 | ATR_00061G02410 | 1 | |
| Tree-based ortholog | 1-to-1 | ATR_00061G02410 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00061G02410 | 1 | ||
| Arabidopsis lyrata | Orthologous gene family | many-to-many | AL8G00160 AL8G10920 | 2 | |
| Tree-based ortholog | 1-to-1 | AL8G10920 | 1 | ||
| Anchor point | N/A | AL8G10920 AL8G12040 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL8G10920 | 1 | ||
| Beta vulgaris | Orthologous gene family | many-to-many | BV4G02780 BV9G09810 | 2 | |
| Tree-based ortholog | 1-to-1 | BV4G02780 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV9G09810 | 1 | ||
| Brassica rapa | Orthologous gene family | many-to-many | BR02G34730 BR06G30550 BR09G04500 ... | 4 | |
| Tree-based ortholog | 1-to-1 | BR06G30550 | 1 | ||
| Anchor point | N/A | BR02G34730 BR09G04500 BR06G30550 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | BR02G34730 BR06G30550 | 2 | ||
| Capsella rubella | Orthologous gene family | many-to-many | CRU_008G00060 CRU_008G07730 | 2 | |
| Tree-based ortholog | 1-to-1 | CRU_008G07730 | 1 | ||
| Anchor point | N/A | CRU_008G07730 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_008G07730 | 1 | ||
| Carica papaya | Orthologous gene family | many-to-1 | CP00027G02290 | 1 | |
| Tree-based ortholog | 1-to-1 | CP00211G00340 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00027G02290 | 1 | ||
| Chlamydomonas reinhardtii | Orthologous gene family | many-to-1 | CR02G12100 | 1 | |
| Tree-based ortholog | 1-to-1 | CR02G12100 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR02G12100 | 1 | ||
| Citrullus lanatus | Orthologous gene family | many-to-many | CL01G12900 CL02G02920 | 2 | |
| Tree-based ortholog | 1-to-1 | CL02G02920 | 1 | ||
| Anchor point | N/A | CL02G02920 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL02G02920 | 1 | ||
| Citrus sinensis | Orthologous gene family | many-to-many | CS00007G04190 CS00193G00100 | 2 | |
| Tree-based ortholog | 1-to-1 | CS00193G00100 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00193G00100 | 1 | ||
| Cucumis melo | Orthologous gene family | many-to-many | CM00066G00670 CM00087G00070 | 2 | |
| Tree-based ortholog | 1-to-1 | CM00066G00670 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00066G00670 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | many-to-many | EG0008G07270 EG0014G00260 | 2 | |
| Tree-based ortholog | 1-to-many | EG0114G00050 EG0008G07270 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0008G07270 | 1 | ||
| Fragaria vesca | Orthologous gene family | many-to-many | FV3G02980 FV6G32800 | 2 | |
| Tree-based ortholog | 1-to-1 | FV6G32800 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV6G32800 | 1 | ||
| Glycine max | Orthologous gene family | many-to-many | GM02G47860 GM07G39870 GM14G00760 ... | 4 | |
| Tree-based ortholog | 1-to-many | GM14G00760 GM02G47860 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM02G47860 GM14G00760 | 2 | ||
| Gossypium raimondii | Orthologous gene family | many-to-many | GR07G16560 GR10G24830 | 2 | |
| Tree-based ortholog | 1-to-1 | GR07G16560 | 1 | ||
| Anchor point | N/A | GR07G16560 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR07G16560 | 1 | ||
| Lotus japonicus | Orthologous gene family | many-to-many | LJ2G050070 LJ4G000540 | 2 | |
| Tree-based ortholog | 1-to-1 | LJ6G002050 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ2G050070 | 1 | ||
| Malus domestica | Orthologous gene family | many-to-many | MD00G016720 MD17G010300 | 2 | |
| Tree-based ortholog | 1-to-many | MD00G016720 MD17G010300 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD00G016720 | 1 | ||
| Manihot esculenta | Orthologous gene family | many-to-many | ME11174G00040 ME11388G00080 | 2 | |
| Tree-based ortholog | 1-to-many | ME11388G00080 ME11174G00040 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME11388G00080 | 1 | ||
| Medicago truncatula | Orthologous gene family | many-to-many | MT00G42300 MT4G134090 MT5G098310 | 3 | |
| Tree-based ortholog | 1-to-many | MT5G098310 MT00G42300 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT5G098310 | 1 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS01G02020 OS09G07830 | 2 | |
| Tree-based ortholog | 1-to-1 | OS09G07830 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS09G07830 | 1 | ||
| Ostreococcus lucimarinus | Tree-based ortholog | 1-to-1 | OL06G04380 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL06G04380 | 1 | ||
| Physcomitrella patens | Orthologous gene family | many-to-1 | PP00160G00190 | 1 | |
| Tree-based ortholog | 1-to-1 | PP00160G00190 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PP00160G00190 | 1 | ||
| Populus trichocarpa | Orthologous gene family | many-to-many | PT06G00440 PT14G16870 | 2 | |
| Tree-based ortholog | 1-to-1 | PT14G16870 | 1 | ||
| Anchor point | N/A | PT14G16870 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT14G16870 | 1 | ||
| Prunus persica | Orthologous gene family | many-to-many | PPE_003G17860 PPE_004G00320 | 2 | |
| Tree-based ortholog | 1-to-1 | PPE_003G17860 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_003G17860 | 1 | ||
| Ricinus communis | Orthologous gene family | many-to-many | RC29732G00070 RC29826G00030 | 2 | |
| Tree-based ortholog | 1-to-1 | RC29732G00070 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29826G00030 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | many-to-many | SL04G015100 SL05G017760 SL07G045350 | 3 | |
| Tree-based ortholog | 1-to-many | SL05G017760 SL07G045350 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL07G045350 | 1 | ||
| Solanum tuberosum | Orthologous gene family | many-to-many | ST04G013310 ST05G019560 ST07G017430 | 3 | |
| Tree-based ortholog | 1-to-many | ST05G019560 ST07G017430 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST05G019560 | 1 | ||
| Thellungiella parvula | Orthologous gene family | many-to-many | TP2G12420 TP2G18600 | 2 | |
| Tree-based ortholog | 1-to-1 | TP2G18600 | 1 | ||
| Anchor point | N/A | TP2G18600 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP2G18600 | 1 | ||
| Theobroma cacao | Orthologous gene family | many-to-many | TC0001G19120 TC0006G23330 | 2 | |
| Tree-based ortholog | 1-to-1 | TC0001G19120 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0001G19120 | 1 | ||
| Vitis vinifera | Orthologous gene family | many-to-many | VV00G20250 VV12G09850 | 2 | |
| Tree-based ortholog | 1-to-1 | VV12G09850 | 1 | ||
| Anchor point | N/A | VV12G09850 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV12G09850 | 1 | ||
| Zea mays | Orthologous gene family | many-to-many | ZM01G17450 ZM01G30650 ZM09G19140 | 3 | |
| Tree-based ortholog | 1-to-many | ZM09G19140 ZM01G17450 ZM01G30650 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM01G30650 | 1 |