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Integrative Orthology Viewer:
AT5G43880
(Arabidopsis thaliana)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Arabidopsis thaliana | Orthologous gene family | AT5G43880 | 1 |  |
| Tree-based ortholog | AT5G43880 | 1 | ||
| Anchor point | AT2G20240 AT4G28760 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | AT5G43880 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Tree-based ortholog | 1-to-many | ATR_00034G01320 ATR_00039G00730 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00039G00730 | 1 | ||
| Arabidopsis lyrata | Tree-based ortholog | 1-to-1 | AL8G06120 | 1 | |
| Anchor point | many-to-many | AL7G13000 AL8G06120 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL8G06120 | 1 | ||
| Beta vulgaris | Tree-based ortholog | 1-to-1 | BV7G00670 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV7G00670 | 1 | ||
| Brassica rapa | Tree-based ortholog | 1-to-1 | BR09G20030 | 1 | |
| Anchor point | many-to-1 | BR09G20030 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR09G20030 | 1 | ||
| Capsella rubella | Tree-based ortholog | 1-to-1 | CRU_008G04630 | 1 | |
| Anchor point | many-to-many | CRU_007G11200 CRU_008G04630 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_008G04630 | 1 | ||
| Carica papaya | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00008G02010 | 1 | |
| Citrullus lanatus | Tree-based ortholog | 1-to-many | CL09G08910 CL07G00720 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL09G08910 | 1 | ||
| Citrus sinensis | Tree-based ortholog | 1-to-1 | CS00029G00130 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00029G00130 | 1 | ||
| Cucumis melo | Tree-based ortholog | 1-to-many | CM00066G00220 CM00018G00350 | 2 | |
| Anchor point | many-to-1 | CM00018G00350 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00066G00220 | 1 | ||
| Eucalyptus grandis | Tree-based ortholog | 1-to-many | EG0011G30430 EG0008G07090 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0008G07090 | 1 | ||
| Fragaria vesca | Tree-based ortholog | 1-to-1 | FV2G10810 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV2G10810 | 1 | ||
| Glycine max | Tree-based ortholog | 1-to-many | GM10G04810 GM13G19200 GM03G32680 ... | 4 | |
| Anchor point | many-to-many | GM03G32680 GM19G35430 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM03G32680 GM19G35430 | 2 | ||
| Gossypium raimondii | Tree-based ortholog | 1-to-many | GR04G22330 GR01G23560 | 2 | |
| Anchor point | many-to-1 | GR04G22330 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR01G23560 | 1 | ||
| Malus domestica | Tree-based ortholog | 1-to-many | MD10G013090 MD05G014820 | 2 | |
| Anchor point | many-to-1 | MD05G014820 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD05G014820 MD10G013090 | 2 | ||
| Manihot esculenta | Tree-based ortholog | 1-to-many | ME06825G00400 ME11378G00160 | 2 | |
| Anchor point | many-to-1 | ME06825G00400 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME06825G00400 | 1 | ||
| Medicago truncatula | Tree-based ortholog | 1-to-many | MT1G069190 MT7G099410 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT7G099410 | 1 | ||
| Oryza sativa ssp. japonica | Tree-based ortholog | 1-to-many | OS02G57140 OS03G04990 OS02G40410 ... | 4 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS03G04990 | 1 | ||
| Populus trichocarpa | Tree-based ortholog | 1-to-many | PT14G19460 PT02G25360 | 2 | |
| Anchor point | many-to-1 | PT14G19460 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT02G25360 | 1 | ||
| Prunus persica | Tree-based ortholog | 1-to-1 | PPE_008G22440 | 1 | |
| Anchor point | many-to-1 | PPE_008G22440 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_008G22440 | 1 | ||
| Ricinus communis | Tree-based ortholog | 1-to-1 | RC30204G00920 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC30204G00920 | 1 | ||
| Solanum lycopersicum | Tree-based ortholog | 1-to-many | SL06G083660 SL09G063080 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL06G083660 | 1 | ||
| Solanum tuberosum | Tree-based ortholog | 1-to-many | ST06G034120 ST09G018430 | 2 | |
| Anchor point | many-to-1 | ST06G034120 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST06G034120 | 1 | ||
| Thellungiella parvula | Tree-based ortholog | 1-to-1 | TP2G08680 | 1 | |
| Anchor point | many-to-many | TP7G26770 TP2G08680 TP3G33470 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP2G08680 | 1 | ||
| Theobroma cacao | Tree-based ortholog | 1-to-1 | TC0001G24260 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0001G24260 | 1 | ||
| Vitis vinifera | Tree-based ortholog | 1-to-1 | VV07G12110 | 1 | |
| Anchor point | many-to-1 | VV07G12110 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV07G12110 | 1 | ||
| Zea mays | Tree-based ortholog | 1-to-many | ZM05G44120 ZM04G25130 ZM01G03300 ... | 4 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM01G03300 | 1 |