Integrative Orthology Viewer: AT5G43870 (Arabidopsis thaliana)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Arabidopsis thaliana | Orthologous gene family | AT5G43870 | 1 | |
Tree-based ortholog | AT5G43870 | 1 | ||
Anchor point | AT3G22810 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | AT5G43870 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Tree-based ortholog | 1-to-1 | ATR_00002G06000 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00002G06000 | 1 | ||
Arabidopsis lyrata | Orthologous gene family | 1-to-1 | AL8G06130 | 1 | |
Tree-based ortholog | 1-to-1 | AL8G06130 | 1 | ||
Anchor point | 1-to-many | AL3G25140 AL8G06130 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL8G06130 | 1 | ||
Beta vulgaris | Tree-based ortholog | 1-to-1 | BV0G81010 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV0G81010 | 1 | ||
Brassica rapa | Orthologous gene family | 1-to-1 | BR06G38460 | 1 | |
Tree-based ortholog | 1-to-1 | BR00G07060 | 1 | ||
Anchor point | 1-to-many | BR06G38460 BR00G07060 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR06G38460 | 1 | ||
Capsella rubella | Orthologous gene family | 1-to-1 | CRU_008G04640 | 1 | |
Tree-based ortholog | 1-to-1 | CRU_008G04640 | 1 | ||
Anchor point | 1-to-many | CRU_003G21970 CRU_008G04640 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_008G04640 | 1 | ||
Carica papaya | Tree-based ortholog | 1-to-1 | CP00044G01120 | 1 | |
Anchor point | 1-to-1 | CP00044G01120 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00044G01120 | 1 | ||
Citrullus lanatus | Tree-based ortholog | 1-to-1 | CL05G05390 | 1 | |
Anchor point | 1-to-many | CL05G05390 CL07G02570 CL06G06200 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL05G05390 | 1 | ||
Citrus sinensis | Tree-based ortholog | 1-to-1 | CS00011G00260 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00011G00260 | 1 | ||
Cucumis melo | Tree-based ortholog | 1-to-1 | CM00006G06070 | 1 | |
Anchor point | 1-to-1 | CM00006G06070 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00022G00940 | 1 | ||
Eucalyptus grandis | Tree-based ortholog | 1-to-1 | EG0002G08440 | 1 | |
Anchor point | 1-to-1 | EG0011G28150 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0002G08440 | 1 | ||
Fragaria vesca | Tree-based ortholog | 1-to-1 | FV4G05740 | 1 | |
Anchor point | 1-to-1 | FV4G05740 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV4G05740 | 1 | ||
Glycine max | Tree-based ortholog | 1-to-many | GM02G00760 GM10G00600 GM20G28820 ... | 4 | |
Anchor point | 1-to-many | GM20G28820 GM10G38990 GM19G34180 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM20G28820 GM10G38990 | 2 | ||
Gossypium raimondii | Orthologous gene family | 1-to-1 | GR06G24200 | 1 | |
Tree-based ortholog | 1-to-many | GR05G04520 GR06G24200 | 2 | ||
Anchor point | 1-to-many | GR05G04520 GR06G24200 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR05G04520 | 1 | ||
Lotus japonicus | Tree-based ortholog | 1-to-1 | LJ2G016390 | 1 | |
Anchor point | 1-to-1 | LJ5G034630 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ5G034630 | 1 | ||
Malus domestica | Tree-based ortholog | 1-to-many | MD13G019210 MD00G479510 MD00G108660 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD13G019210 | 1 | ||
Manihot esculenta | Orthologous gene family | 1-to-1 | ME01551G01780 | 1 | |
Tree-based ortholog | 1-to-many | ME01551G01780 ME10563G00290 | 2 | ||
Anchor point | 1-to-many | ME01551G01780 ME10563G00290 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME10563G00290 | 1 | ||
Medicago truncatula | Tree-based ortholog | 1-to-many | MT1G041395 MT1G102980 | 2 | |
Anchor point | 1-to-1 | MT1G102980 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT1G041395 | 1 | ||
Oryza sativa ssp. japonica | Tree-based ortholog | 1-to-many | OS03G43510 OS12G41140 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS03G43510 | 1 | ||
Physcomitrella patens | Tree-based ortholog | 1-to-1 | PP00155G00500 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PP00155G00500 | 1 | ||
Populus trichocarpa | Tree-based ortholog | 1-to-many | PT08G15700 PT10G08240 | 2 | |
Anchor point | 1-to-many | PT10G08240 PT08G15700 PT05G21380 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT10G08240 PT08G15700 | 2 | ||
Prunus persica | Tree-based ortholog | 1-to-1 | PPE_001G01980 | 1 | |
Anchor point | 1-to-1 | PPE_001G01980 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_001G01980 | 1 | ||
Ricinus communis | Tree-based ortholog | 1-to-1 | RC29844G00730 | 1 | |
Anchor point | 1-to-1 | RC29844G00730 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29844G00730 | 1 | ||
Solanum lycopersicum | Tree-based ortholog | 1-to-1 | SL09G082580 | 1 | |
Anchor point | 1-to-many | SL09G082580 SL09G065590 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL09G082580 | 1 | ||
Solanum tuberosum | Tree-based ortholog | 1-to-1 | ST09G024560 | 1 | |
Anchor point | 1-to-many | ST09G024560 ST09G020350 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST09G024560 | 1 | ||
Thellungiella parvula | Tree-based ortholog | 1-to-1 | TP2G08670 | 1 | |
Anchor point | 1-to-many | TP2G08670 TP3G20510 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP2G08670 | 1 | ||
Theobroma cacao | Tree-based ortholog | 1-to-1 | TC0004G24060 | 1 | |
Anchor point | 1-to-1 | TC0004G24060 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0004G24060 | 1 | ||
Vitis vinifera | Tree-based ortholog | 1-to-1 | VV05G05380 | 1 | |
Anchor point | 1-to-1 | VV05G05380 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV05G05380 | 1 | ||
Zea mays | Tree-based ortholog | 1-to-many | ZM05G07710 ZM01G26510 ZM03G24180 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM05G07710 | 1 |