Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
AT5G43690
(Arabidopsis thaliana)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Arabidopsis thaliana | Orthologous gene family | AT5G43690 | 1 |  |
| Tree-based ortholog | AT5G43690 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | AT5G43690 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Tree-based ortholog | 1-to-many | ATR_00065G01200 ATR_00065G01240 ATR_02674G00010 ... | 7 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ATR_00065G01170 ATR_00065G01210 ATR_02674G00010 ... | 4 | ||
| Arabidopsis lyrata | Tree-based ortholog | 1-to-1 | AL2G02840 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL1G14100 | 1 | ||
| Beta vulgaris | Tree-based ortholog | 1-to-1 | BV6G06300 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV6G06300 | 1 | ||
| Brassica rapa | Orthologous gene family | 1-to-1 | BR03G02190 | 1 | |
| Tree-based ortholog | 1-to-1 | BR10G24300 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | BR03G02220 BR03G02190 BR03G02210 | 3 | ||
| Capsella rubella | Orthologous gene family | 1-to-1 | CRU_001G12770 | 1 | |
| Tree-based ortholog | 1-to-1 | CRU_001G12770 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_001G12770 | 1 | ||
| Carica papaya | Tree-based ortholog | 1-to-1 | CP00266G00010 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00266G00010 | 1 | ||
| Citrus sinensis | Tree-based ortholog | 1-to-1 | CS00019G01610 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00019G01610 | 1 | ||
| Eucalyptus grandis | Tree-based ortholog | 1-to-many | EG0002G25590 EG0002G25570 EG0011G29140 ... | 26 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | EG0003G13230 EG0003G13120 EG0004G12040 ... | 21 | ||
| Fragaria vesca | Tree-based ortholog | 1-to-many | FV0G03460 FV0G03860 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | FV0G03460 FV0G03860 | 2 | ||
| Glycine max | Tree-based ortholog | 1-to-1 | GM08G36400 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GM08G36400 | 1 | ||
| Gossypium raimondii | Tree-based ortholog | 1-to-many | GR13G09710 GR13G09720 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR13G09720 | 1 | ||
| Lotus japonicus | Tree-based ortholog | 1-to-1 | LJ4G029420 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ4G029420 | 1 | ||
| Malus domestica | Tree-based ortholog | 1-to-many | MD16G002540 MD16G002550 MD00G181380 ... | 6 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD02G026260 MD00G224770 | 2 | ||
| Manihot esculenta | Tree-based ortholog | 1-to-1 | ME04262G00030 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME04262G00030 | 1 | ||
| Medicago truncatula | Tree-based ortholog | 1-to-many | MT8G066210 MT8G066220 MT3G046670 ... | 5 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MT8G066210 MT3G046670 MT00G40590 ... | 5 | ||
| Oryza sativa ssp. japonica | Tree-based ortholog | 1-to-many | OS11G04550 OS12G04350 OS12G04340 ... | 32 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | OS04G44460 OS06G42120 | 2 | ||
| Ostreococcus lucimarinus | Tree-based ortholog | 1-to-1 | OL07G01450 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL07G01450 | 1 | ||
| Populus trichocarpa | Tree-based ortholog | 1-to-many | PT10G13850 PT10G13840 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT10G13850 PT10G13840 | 2 | ||
| Prunus persica | Tree-based ortholog | 1-to-1 | PPE_001G30480 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_002G03050 | 1 | ||
| Ricinus communis | Tree-based ortholog | 1-to-1 | RC30174G04530 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC30174G04530 | 1 | ||
| Solanum lycopersicum | Tree-based ortholog | 1-to-many | SL05G047510 SL05G047490 SL11G051090 ... | 19 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL11G051090 | 1 | ||
| Solanum tuberosum | Tree-based ortholog | 1-to-many | ST05G020430 ST05G020440 ST05G006160 ... | 25 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST11G018070 | 1 | ||
| Thellungiella parvula | Tree-based ortholog | 1-to-1 | TP1G35030 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP1G35030 | 1 | ||
| Theobroma cacao | Tree-based ortholog | 1-to-many | TC0002G32240 TC0002G32260 TC0002G32250 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0002G32240 | 1 | ||
| Vitis vinifera | Tree-based ortholog | 1-to-1 | VV04G06960 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV13G12290 | 1 | ||
| Zea mays | Tree-based ortholog | 1-to-many | ZM03G03600 ZM01G48910 ZM03G21080 ... | 4 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM07G26760 | 1 |