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Integrative Orthology Viewer:
AT5G43460
(Arabidopsis thaliana)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Arabidopsis thaliana | Orthologous gene family | AT5G43460 | 1 |  |
| Tree-based ortholog | AT5G43460 | 1 | ||
| Anchor point | AT1G04340 AT3G23175 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | AT5G43460 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Tree-based ortholog | 1-to-many | ATR_00157G00160 ATR_00012G03260 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ATR_00088G00640 ATR_00012G03260 | 2 | ||
| Arabidopsis lyrata | Orthologous gene family | 1-to-1 | AL0G00460 | 1 | |
| Tree-based ortholog | 1-to-1 | AL0G00460 | 1 | ||
| Anchor point | many-to-1 | AL3G25760 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL0G00460 | 1 | ||
| Beta vulgaris | Tree-based ortholog | 1-to-1 | BV3G07020 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV3G07020 | 1 | ||
| Brassica rapa | Orthologous gene family | 1-to-1 | BR09G20140 | 1 | |
| Tree-based ortholog | 1-to-1 | BR09G20140 | 1 | ||
| Anchor point | many-to-many | BR10G03450 BR08G31400 BR09G20140 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR09G20140 | 1 | ||
| Capsella rubella | Orthologous gene family | 1-to-1 | CRU_008G05030 | 1 | |
| Tree-based ortholog | 1-to-1 | CRU_008G05030 | 1 | ||
| Anchor point | many-to-many | CRU_008G05030 CRU_001G03240 CRU_003G22430 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_008G05030 | 1 | ||
| Carica papaya | Tree-based ortholog | 1-to-1 | CP00050G00370 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00050G00370 | 1 | ||
| Citrullus lanatus | Tree-based ortholog | 1-to-1 | CL06G06650 | 1 | |
| Anchor point | many-to-1 | CL06G06650 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL06G06660 | 1 | ||
| Citrus sinensis | Orthologous gene family | 1-to-1 | CS00439G00050 | 1 | |
| Tree-based ortholog | 1-to-1 | CS00439G00050 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00439G00050 | 1 | ||
| Cucumis melo | Orthologous gene family | 1-to-1 | CM00006G05410 | 1 | |
| Tree-based ortholog | 1-to-many | CM00057G00070 CM00006G05410 | 2 | ||
| Anchor point | many-to-many | CM00057G00070 CM00006G05410 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00006G05410 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | 1-to-1 | EG0008G01680 | 1 | |
| Tree-based ortholog | 1-to-1 | EG0008G01680 | 1 | ||
| Anchor point | many-to-1 | EG0008G01680 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0008G01680 | 1 | ||
| Fragaria vesca | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | FV1G00150 FV4G07060 | 2 | |
| Glycine max | Orthologous gene family | 1-to-many | GM10G01060 GM10G33150 GM20G21970 ... | 4 | |
| Tree-based ortholog | 1-to-many | GM10G01060 GM20G21970 GM09G39100 ... | 6 | ||
| Anchor point | many-to-many | GM19G34610 GM10G33150 GM20G34490 ... | 4 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM20G21970 GM10G33150 GM10G01060 | 3 | ||
| Gossypium raimondii | Orthologous gene family | 1-to-many | GR02G02500 GR11G17220 | 2 | |
| Tree-based ortholog | 1-to-many | GR11G17130 GR11G17220 GR02G02500 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GR02G02500 GR11G17220 | 2 | ||
| Lotus japonicus | Orthologous gene family | 1-to-1 | LJ5G020950 | 1 | |
| Tree-based ortholog | 1-to-1 | LJ5G020950 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ5G020950 | 1 | ||
| Malus domestica | Orthologous gene family | 1-to-many | MD00G316220 MD09G010480 MD13G022760 | 3 | |
| Tree-based ortholog | 1-to-many | MD00G316220 MD13G022760 MD09G010480 ... | 5 | ||
| Anchor point | many-to-1 | MD13G022760 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD09G010480 MD13G022760 MD00G316220 | 3 | ||
| Manihot esculenta | Orthologous gene family | 1-to-1 | ME10563G00960 | 1 | |
| Tree-based ortholog | 1-to-1 | ME10563G00960 | 1 | ||
| Anchor point | many-to-many | ME01551G01180 ME10563G00960 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME10563G00960 | 1 | ||
| Medicago truncatula | Orthologous gene family | 1-to-1 | MT1G073940 | 1 | |
| Tree-based ortholog | 1-to-1 | MT1G073940 | 1 | ||
| Anchor point | many-to-1 | MT1G073940 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT1G073940 | 1 | ||
| Oryza sativa ssp. japonica | Tree-based ortholog | 1-to-many | OS10G30860 OS03G05520 OS04G10240 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | OS03G05520 OS04G10240 | 2 | ||
| Ostreococcus lucimarinus | Tree-based ortholog | 1-to-1 | OL03G03460 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL03G03460 | 1 | ||
| Physcomitrella patens | Tree-based ortholog | 1-to-many | PP00069G00780 PP00196G00270 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00069G00780 PP00196G00270 | 2 | ||
| Populus trichocarpa | Orthologous gene family | 1-to-1 | PT08G16510 | 1 | |
| Tree-based ortholog | 1-to-many | PT08G16510 PT10G07350 | 2 | ||
| Anchor point | many-to-many | PT08G16510 PT10G07340 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT08G16510 | 1 | ||
| Prunus persica | Orthologous gene family | 1-to-1 | PPE_001G03390 | 1 | |
| Tree-based ortholog | 1-to-1 | PPE_001G03390 | 1 | ||
| Anchor point | many-to-1 | PPE_001G03390 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_001G03390 | 1 | ||
| Ricinus communis | Orthologous gene family | 1-to-1 | RC29603G00180 | 1 | |
| Tree-based ortholog | 1-to-1 | RC29603G00180 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29603G00180 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | 1-to-1 | SL06G053660 | 1 | |
| Tree-based ortholog | 1-to-1 | SL06G053660 | 1 | ||
| Anchor point | many-to-many | SL03G005470 SL09G089670 SL06G053660 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL06G053660 | 1 | ||
| Solanum tuberosum | Orthologous gene family | 1-to-1 | ST06G017150 | 1 | |
| Tree-based ortholog | 1-to-1 | ST06G017150 | 1 | ||
| Anchor point | many-to-many | ST03G005670 ST06G017150 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST03G005670 | 1 | ||
| Thellungiella parvula | Orthologous gene family | 1-to-1 | TP2G08340 | 1 | |
| Tree-based ortholog | 1-to-1 | TP2G08340 | 1 | ||
| Anchor point | many-to-many | TP2G08340 TP1G03150 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP2G08340 | 1 | ||
| Theobroma cacao | Orthologous gene family | 1-to-1 | TC0004G25340 | 1 | |
| Tree-based ortholog | 1-to-1 | TC0004G25340 | 1 | ||
| Anchor point | many-to-1 | TC0004G25340 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0004G25340 | 1 | ||
| Vitis vinifera | Orthologous gene family | 1-to-1 | VV05G07660 | 1 | |
| Tree-based ortholog | 1-to-1 | VV05G07660 | 1 | ||
| Anchor point | many-to-1 | VV05G07660 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV05G07660 | 1 | ||
| Zea mays | Tree-based ortholog | 1-to-1 | ZM09G28490 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM09G28490 | 1 |