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Integrative Orthology Viewer:
AT5G42820
(Arabidopsis thaliana)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Arabidopsis thaliana | Orthologous gene family | AT5G42820 | 1 |  |
| Tree-based ortholog | AT5G42820 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | AT5G42820 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | 1-to-1 | ATR_00022G01080 | 1 | |
| Tree-based ortholog | 1-to-1 | ATR_00022G01080 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00022G01080 | 1 | ||
| Arabidopsis lyrata | Orthologous gene family | 1-to-1 | AL8G08010 | 1 | |
| Tree-based ortholog | 1-to-1 | AL8G08010 | 1 | ||
| Anchor point | N/A | AL8G08010 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL8G08010 | 1 | ||
| Beta vulgaris | Tree-based ortholog | 1-to-1 | BV7G11250 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV7G18300 | 1 | ||
| Brassica rapa | Orthologous gene family | 1-to-1 | BR09G20520 | 1 | |
| Tree-based ortholog | 1-to-1 | BR09G20520 | 1 | ||
| Anchor point | N/A | BR09G20520 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR09G20520 | 1 | ||
| Capsella rubella | Orthologous gene family | 1-to-1 | CRU_001G25100 | 1 | |
| Tree-based ortholog | 1-to-1 | CRU_001G25100 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_001G25100 | 1 | ||
| Carica papaya | Orthologous gene family | 1-to-1 | CP24967G00070 | 1 | |
| Tree-based ortholog | 1-to-1 | CP24967G00070 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP24967G00070 | 1 | ||
| Chlamydomonas reinhardtii | Tree-based ortholog | 1-to-1 | CR06G00480 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR06G00480 | 1 | ||
| Citrullus lanatus | Orthologous gene family | 1-to-1 | CL11G13020 | 1 | |
| Tree-based ortholog | 1-to-1 | CL11G13020 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL11G13020 | 1 | ||
| Citrus sinensis | Orthologous gene family | 1-to-1 | CS00002G07280 | 1 | |
| Tree-based ortholog | 1-to-1 | CS00002G07280 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00056G00280 | 1 | ||
| Cucumis melo | Orthologous gene family | 1-to-1 | CM00029G04490 | 1 | |
| Tree-based ortholog | 1-to-1 | CM00029G04490 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00029G04490 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | 1-to-1 | EG0006G30770 | 1 | |
| Tree-based ortholog | 1-to-1 | EG0006G30770 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0006G30770 | 1 | ||
| Fragaria vesca | Orthologous gene family | 1-to-1 | FV5G28110 | 1 | |
| Tree-based ortholog | 1-to-1 | FV5G28110 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV5G28110 | 1 | ||
| Glycine max | Orthologous gene family | 1-to-many | GM07G20090 GM20G00950 | 2 | |
| Tree-based ortholog | 1-to-many | GM07G20090 GM20G00950 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM07G20090 GM20G00950 | 2 | ||
| Gossypium raimondii | Orthologous gene family | 1-to-1 | GR04G21870 | 1 | |
| Tree-based ortholog | 1-to-many | GR04G07530 GR04G21870 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR04G21870 | 1 | ||
| Lotus japonicus | Tree-based ortholog | 1-to-many | LJ1G066150 LJ3G043090 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ3G043090 | 1 | ||
| Malus domestica | Orthologous gene family | 1-to-1 | MD06G000310 | 1 | |
| Tree-based ortholog | 1-to-1 | MD06G000310 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD06G000310 | 1 | ||
| Manihot esculenta | Orthologous gene family | 1-to-1 | ME04047G00120 | 1 | |
| Tree-based ortholog | 1-to-1 | ME04047G00120 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME05859G00220 | 1 | ||
| Medicago truncatula | Orthologous gene family | 1-to-1 | MT1G035130 | 1 | |
| Tree-based ortholog | 1-to-1 | MT1G035130 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT2G084715 | 1 | ||
| Oryza sativa ssp. japonica | Tree-based ortholog | 1-to-many | OS09G31482 OS05G48960 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS09G31482 | 1 | ||
| Ostreococcus lucimarinus | Tree-based ortholog | 1-to-1 | OL15G00920 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL15G00920 | 1 | ||
| Physcomitrella patens | Tree-based ortholog | 1-to-1 | PP00333G00210 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00015G00050 PP00215G00350 | 2 | ||
| Populus trichocarpa | Orthologous gene family | 1-to-1 | PT05G25800 | 1 | |
| Tree-based ortholog | 1-to-many | PT02G00300 PT05G25800 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT05G25800 | 1 | ||
| Prunus persica | Tree-based ortholog | 1-to-many | PPE_001G53150 PPE_007G14070 PPE_006G11600 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_006G11600 | 1 | ||
| Ricinus communis | Orthologous gene family | 1-to-1 | RC30170G07490 | 1 | |
| Tree-based ortholog | 1-to-1 | RC30170G07490 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC30170G07490 | 1 | ||
| Solanum lycopersicum | Tree-based ortholog | 1-to-many | SL01G103090 SL10G083640 SL11G066830 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL10G083640 | 1 | ||
| Solanum tuberosum | Tree-based ortholog | 1-to-many | ST12G016910 ST01G040080 ST10G025510 ... | 4 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST11G024640 | 1 | ||
| Thellungiella parvula | Orthologous gene family | 1-to-1 | TP2G07520 | 1 | |
| Tree-based ortholog | 1-to-1 | TP2G07520 | 1 | ||
| Anchor point | N/A | TP2G07520 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP2G07520 | 1 | ||
| Theobroma cacao | Orthologous gene family | 1-to-1 | TC0001G26630 | 1 | |
| Tree-based ortholog | 1-to-1 | TC0001G26630 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0001G26630 | 1 | ||
| Vitis vinifera | Tree-based ortholog | 1-to-many | VV12G06470 VV08G11410 VV18G12930 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV08G11410 | 1 | ||
| Zea mays | Tree-based ortholog | 1-to-many | ZM07G18020 ZM08G10580 ZM06G31160 ... | 5 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ZM06G31160 ZM02G46060 ZM08G10580 | 3 |