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Integrative Orthology Viewer:
AT5G42780
(Arabidopsis thaliana)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Arabidopsis thaliana | Orthologous gene family | AT5G42780 | 1 |  |
| Tree-based ortholog | AT5G42780 | 1 | ||
| Anchor point | AT1G75240 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | AT5G42780 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Tree-based ortholog | 1-to-many | ATR_00010G04520 ATR_00119G00530 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00024G00400 | 1 | ||
| Arabidopsis lyrata | Orthologous gene family | 1-to-1 | AL8G08110 | 1 | |
| Tree-based ortholog | 1-to-1 | AL8G08110 | 1 | ||
| Anchor point | 1-to-many | AL8G08110 AL2G24110 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL8G08110 | 1 | ||
| Beta vulgaris | Tree-based ortholog | 1-to-many | BV0G54290 BV0G39110 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV6G15700 | 1 | ||
| Brassica rapa | Orthologous gene family | 1-to-1 | BR09G20560 | 1 | |
| Tree-based ortholog | 1-to-1 | BR09G20560 | 1 | ||
| Anchor point | 1-to-many | BR07G20000 BR09G20560 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR09G20560 | 1 | ||
| Capsella rubella | Orthologous gene family | 1-to-1 | CRU_008G06030 | 1 | |
| Tree-based ortholog | 1-to-1 | CRU_008G06030 | 1 | ||
| Anchor point | 1-to-many | CRU_002G20820 CRU_008G06030 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_008G06030 | 1 | ||
| Carica papaya | Tree-based ortholog | 1-to-1 | CP00002G01150 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00055G00520 | 1 | ||
| Citrullus lanatus | Tree-based ortholog | 1-to-1 | CL04G10270 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL04G10270 | 1 | ||
| Citrus sinensis | Tree-based ortholog | 1-to-1 | CS00498G00120 | 1 | |
| Anchor point | 1-to-1 | CS00002G04340 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00003G04300 | 1 | ||
| Cucumis melo | Tree-based ortholog | 1-to-1 | CM00001G02540 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00001G02540 | 1 | ||
| Eucalyptus grandis | Tree-based ortholog | 1-to-many | EG0007G15570 EG0008G04930 | 2 | |
| Anchor point | 1-to-many | EG0006G12700 EG0007G15570 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0008G04930 | 1 | ||
| Fragaria vesca | Tree-based ortholog | 1-to-1 | FV5G16120 | 1 | |
| Anchor point | 1-to-1 | FV2G50790 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV5G16120 | 1 | ||
| Glycine max | Tree-based ortholog | 1-to-many | GM12G28701 GM12G29001 GM12G29010 ... | 4 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM07G12140 GM09G30061 | 2 | ||
| Gossypium raimondii | Tree-based ortholog | 1-to-many | GR08G04480 GR08G04470 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR06G19060 | 1 | ||
| Lotus japonicus | Tree-based ortholog | 1-to-many | LJ4G038350 LJ6G012730 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ2G030870 | 1 | ||
| Malus domestica | Tree-based ortholog | 1-to-many | MD00G183100 MD06G009570 MD06G020120 ... | 4 | |
| Anchor point | 1-to-1 | MD12G015750 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD06G020120 MD14G022350 | 2 | ||
| Manihot esculenta | Tree-based ortholog | 1-to-many | ME03802G00080 ME08799G00940 ME11170G00200 ... | 5 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME09151G00240 | 1 | ||
| Medicago truncatula | Tree-based ortholog | 1-to-1 | MT6G073013 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT1G077020 | 1 | ||
| Oryza sativa ssp. japonica | Tree-based ortholog | 1-to-1 | OS03G50920 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS05G50310 | 1 | ||
| Physcomitrella patens | Tree-based ortholog | 1-to-1 | PP00031G01200 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00165G00520 PP00003G02180 PP00235G00550 ... | 6 | ||
| Populus trichocarpa | Tree-based ortholog | 1-to-many | PT19G02140 PT12G04090 PT15G03270 | 3 | |
| Anchor point | 1-to-1 | PT02G03520 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT15G03270 PT12G04090 | 2 | ||
| Prunus persica | Tree-based ortholog | 1-to-1 | PPE_005G23980 | 1 | |
| Anchor point | 1-to-1 | PPE_001G38640 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_007G17660 | 1 | ||
| Ricinus communis | Tree-based ortholog | 1-to-1 | RC29680G00540 | 1 | |
| Anchor point | 1-to-1 | RC30170G04070 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29813G00370 | 1 | ||
| Solanum lycopersicum | Tree-based ortholog | 1-to-1 | SL03G098060 | 1 | |
| Anchor point | 1-to-1 | SL04G080490 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL03G098060 | 1 | ||
| Solanum tuberosum | Tree-based ortholog | 1-to-1 | ST03G022700 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST03G022700 | 1 | ||
| Thellungiella parvula | Orthologous gene family | 1-to-1 | TP2G07430 | 1 | |
| Tree-based ortholog | 1-to-1 | TP2G07430 | 1 | ||
| Anchor point | 1-to-many | TP5G30400 TP2G07430 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP2G07430 | 1 | ||
| Theobroma cacao | Tree-based ortholog | 1-to-many | TC0002G02510 TC0002G02500 TC0002G02520 | 3 | |
| Anchor point | 1-to-1 | TC0008G02700 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0003G06750 | 1 | ||
| Vitis vinifera | Tree-based ortholog | 1-to-1 | VV00G26670 | 1 | |
| Anchor point | 1-to-1 | VV18G09000 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | VV18G09000 VV18G04260 | 2 | ||
| Zea mays | Tree-based ortholog | 1-to-many | ZM01G50950 ZM05G05290 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ZM06G31980 ZM08G11300 | 2 |