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Integrative Orthology Viewer:
AT5G41990
(Arabidopsis thaliana)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Arabidopsis thaliana | Orthologous gene family | AT1G49160 AT1G64630 AT3G18750 ... | 4 |  |
| Tree-based ortholog | AT5G41990 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | AT5G41990 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | many-to-many | ATR_00041G00730 ATR_00049G02720 | 2 | |
| Tree-based ortholog | 1-to-many | ATR_00030G00720 ATR_00041G00730 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00041G00730 | 1 | ||
| Arabidopsis lyrata | Orthologous gene family | many-to-many | AL1G43040 AL2G00120 AL3G20330 ... | 4 | |
| Tree-based ortholog | 1-to-1 | AL7G35580 | 1 | ||
| Anchor point | N/A | AL7G35580 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL7G35580 | 1 | ||
| Beta vulgaris | Tree-based ortholog | 1-to-1 | BV5G10550 | 1 | |
| Anchor point | N/A | BV5G10550 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV4G16200 | 1 | ||
| Brassica rapa | Orthologous gene family | many-to-many | BR01G30910 BR02G01330 BR03G35630 | 3 | |
| Tree-based ortholog | 1-to-1 | BR02G01330 | 1 | ||
| Anchor point | N/A | BR02G01330 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR02G01330 | 1 | ||
| Capsella rubella | Orthologous gene family | many-to-many | CRU_001G36440 CRU_003G17720 CRU_006G24790 ... | 4 | |
| Tree-based ortholog | 1-to-1 | CRU_007G31960 | 1 | ||
| Anchor point | N/A | CRU_007G31960 CRU_002G00120 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_007G31960 | 1 | ||
| Carica papaya | Orthologous gene family | many-to-many | CP00096G00620 CP00175G00050 | 2 | |
| Tree-based ortholog | 1-to-1 | CP00042G01040 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00175G00050 | 1 | ||
| Chlamydomonas reinhardtii | Tree-based ortholog | 1-to-many | CR06G13920 CR01G09890 CR01G08690 ... | 5 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | CR01G08700 CR01G08690 | 2 | ||
| Citrullus lanatus | Orthologous gene family | many-to-many | CL01G01450 CL05G00780 | 2 | |
| Tree-based ortholog | 1-to-1 | CL01G01450 | 1 | ||
| Anchor point | N/A | CL01G01450 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL01G01450 | 1 | ||
| Citrus sinensis | Orthologous gene family | many-to-many | CS00001G04650 CS00009G02780 CS00078G00390 | 3 | |
| Tree-based ortholog | 1-to-1 | CS00009G02780 | 1 | ||
| Anchor point | N/A | CS00009G02780 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00009G02780 | 1 | ||
| Cucumis melo | Orthologous gene family | many-to-many | CM00005G07550 CM00006G00810 | 2 | |
| Tree-based ortholog | 1-to-1 | CM00005G07550 | 1 | ||
| Anchor point | N/A | CM00005G07550 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00005G07550 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | many-to-many | EG0004G19790 EG0006G37040 EG0008G40000 | 3 | |
| Tree-based ortholog | 1-to-1 | EG0006G37040 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0004G19790 | 1 | ||
| Fragaria vesca | Orthologous gene family | many-to-many | FV0G46650 FV1G20770 FV7G04990 | 3 | |
| Tree-based ortholog | 1-to-many | FV6G39370 FV6G39260 FV1G17000 ... | 4 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV0G46650 | 1 | ||
| Glycine max | Orthologous gene family | many-to-many | GM06G15610 GM07G05930 GM13G10480 ... | 5 | |
| Tree-based ortholog | 1-to-many | GM13G10480 GM20G16430 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM13G10480 GM20G16430 | 2 | ||
| Gossypium raimondii | Orthologous gene family | many-to-many | GR03G06960 GR03G07560 GR04G15040 ... | 5 | |
| Tree-based ortholog | 1-to-many | GR03G07560 GR08G25730 | 2 | ||
| Anchor point | N/A | GR08G25730 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR03G07560 | 1 | ||
| Lotus japonicus | Orthologous gene family | many-to-many | LJ3G034810 LJ4G043240 | 2 | |
| Tree-based ortholog | 1-to-1 | LJ3G034810 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ4G043240 | 1 | ||
| Malus domestica | Orthologous gene family | many-to-many | MD00G138710 MD00G138750 MD00G441930 ... | 7 | |
| Tree-based ortholog | 1-to-many | MD06G010470 MD00G138750 MD13G019740 ... | 5 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD13G011520 | 1 | ||
| Manihot esculenta | Orthologous gene family | many-to-many | ME02767G00020 ME03581G00500 ME04274G00140 ... | 5 | |
| Tree-based ortholog | 1-to-1 | ME06948G00230 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME09881G00010 | 1 | ||
| Medicago truncatula | Orthologous gene family | many-to-many | MT3G080960 MT3G095680 MT8G027265 ... | 4 | |
| Tree-based ortholog | 1-to-1 | MT3G080960 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT3G080960 | 1 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | many-to-1 | OS02G45130 | 1 | |
| Tree-based ortholog | 1-to-many | OS02G45130 OS11G06140 OS12G06490 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS02G45130 | 1 | ||
| Ostreococcus lucimarinus | Tree-based ortholog | 1-to-1 | OL08G00140 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL08G00140 | 1 | ||
| Physcomitrella patens | Orthologous gene family | many-to-1 | PP00384G00020 | 1 | |
| Tree-based ortholog | 1-to-many | PP00116G00980 PP00236G00210 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PP00384G00020 | 1 | ||
| Populus trichocarpa | Orthologous gene family | many-to-many | PT01G08550 PT03G14530 PT05G05730 ... | 6 | |
| Tree-based ortholog | 1-to-many | PT01G08550 PT03G14530 PT08G03720 ... | 4 | ||
| Anchor point | N/A | PT01G08550 PT03G14530 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT01G08550 PT03G14530 | 2 | ||
| Prunus persica | Orthologous gene family | many-to-many | PPE_002G18600 PPE_005G13600 | 2 | |
| Tree-based ortholog | 1-to-1 | PPE_005G13600 | 1 | ||
| Anchor point | N/A | PPE_005G13600 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_005G13600 | 1 | ||
| Ricinus communis | Orthologous gene family | many-to-many | RC27747G00070 RC28161G00080 RC29742G00100 ... | 4 | |
| Tree-based ortholog | 1-to-many | RC30068G00460 RC28161G00080 | 2 | ||
| Anchor point | N/A | RC30068G00460 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC30068G00460 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | many-to-many | SL01G096170 SL08G082980 SL10G009350 | 3 | |
| Tree-based ortholog | 1-to-many | SL10G009060 SL02G087590 SL00G153680 | 3 | ||
| Anchor point | N/A | SL08G082980 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL08G082980 | 1 | ||
| Solanum tuberosum | Orthologous gene family | many-to-many | ST01G033610 ST08G027300 | 2 | |
| Tree-based ortholog | 1-to-many | ST10G009370 ST02G035280 ST10G021230 | 3 | ||
| Anchor point | N/A | ST08G027300 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST08G027300 | 1 | ||
| Thellungiella parvula | Orthologous gene family | many-to-many | TP2G00080 TP3G16790 TP7G00140 | 3 | |
| Tree-based ortholog | 1-to-1 | TP7G00140 | 1 | ||
| Anchor point | N/A | TP7G00140 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP7G00140 | 1 | ||
| Theobroma cacao | Orthologous gene family | many-to-many | TC0001G12010 TC0001G33630 | 2 | |
| Tree-based ortholog | 1-to-1 | TC0003G22230 | 1 | ||
| Anchor point | N/A | TC0003G22230 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0003G22230 | 1 | ||
| Vitis vinifera | Orthologous gene family | many-to-many | VV02G05440 VV04G05450 VV15G07040 | 3 | |
| Tree-based ortholog | 1-to-1 | VV17G10060 | 1 | ||
| Anchor point | N/A | VV02G05440 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV02G05440 | 1 | ||
| Zea mays | Orthologous gene family | many-to-many | ZM02G37370 ZM04G20990 | 2 | |
| Tree-based ortholog | 1-to-many | ZM05G36240 ZM04G20990 ZM04G34590 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM04G20990 | 1 |