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Integrative Orthology Viewer:
AT5G39970
(Arabidopsis thaliana)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Arabidopsis thaliana | Orthologous gene family | AT1G74790 AT5G39970 AT5G62630 | 3 |  |
| Tree-based ortholog | AT5G39970 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | AT5G39970 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | many-to-1 | ATR_00133G00170 | 1 | |
| Tree-based ortholog | 1-to-1 | ATR_00133G00170 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00133G00170 | 1 | ||
| Arabidopsis lyrata | Orthologous gene family | many-to-many | AL2G23640 AL7G38140 AL8G29110 | 3 | |
| Tree-based ortholog | 1-to-1 | AL7G38140 | 1 | ||
| Anchor point | N/A | AL7G38140 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL7G38140 | 1 | ||
| Beta vulgaris | Orthologous gene family | many-to-many | BV5G01530 BV6G03660 | 2 | |
| Tree-based ortholog | 1-to-many | BV5G01530 BV6G03660 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV5G01530 | 1 | ||
| Brassica rapa | Orthologous gene family | many-to-many | BR02G00620 BR06G29180 BR07G30250 | 3 | |
| Tree-based ortholog | 1-to-1 | BR02G00620 | 1 | ||
| Anchor point | N/A | BR02G00620 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR02G00620 | 1 | ||
| Capsella rubella | Orthologous gene family | many-to-many | CRU_002G20360 CRU_007G34420 CRU_008G22770 | 3 | |
| Tree-based ortholog | 1-to-1 | CRU_007G34420 | 1 | ||
| Anchor point | N/A | CRU_007G34420 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_007G34420 | 1 | ||
| Carica papaya | Orthologous gene family | many-to-1 | CP00017G01610 | 1 | |
| Tree-based ortholog | 1-to-1 | CP00017G01610 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00017G01610 | 1 | ||
| Citrullus lanatus | Orthologous gene family | many-to-1 | CL01G09590 | 1 | |
| Tree-based ortholog | 1-to-1 | CL01G09590 | 1 | ||
| Anchor point | N/A | CL01G09590 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL01G09590 | 1 | ||
| Citrus sinensis | Orthologous gene family | many-to-many | CS00009G00060 CS00015G01100 | 2 | |
| Tree-based ortholog | 1-to-1 | CS00015G01100 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00015G01100 | 1 | ||
| Cucumis melo | Orthologous gene family | many-to-1 | CM00001G03180 | 1 | |
| Tree-based ortholog | 1-to-1 | CM00001G03180 | 1 | ||
| Anchor point | N/A | CM00001G03180 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00001G03180 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | many-to-many | EG0002G03330 EG0010G18570 EG0010G18600 | 3 | |
| Tree-based ortholog | 1-to-many | EG0010G18570 EG0010G18600 | 2 | ||
| Anchor point | N/A | EG0010G18570 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | EG0010G18600 EG0010G18570 | 2 | ||
| Fragaria vesca | Orthologous gene family | many-to-many | FV5G18420 FV6G04450 | 2 | |
| Tree-based ortholog | 1-to-1 | FV6G04450 | 1 | ||
| Anchor point | N/A | FV6G04450 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV6G04450 | 1 | ||
| Glycine max | Orthologous gene family | many-to-many | GM04G34600 GM06G20070 | 2 | |
| Tree-based ortholog | 1-to-many | GM04G34600 GM06G20070 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM04G34600 GM06G20070 | 2 | ||
| Gossypium raimondii | Orthologous gene family | many-to-many | GR03G07110 GR03G09880 GR06G02310 | 3 | |
| Tree-based ortholog | 1-to-1 | GR06G02310 | 1 | ||
| Anchor point | N/A | GR06G02310 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR06G02310 | 1 | ||
| Malus domestica | Orthologous gene family | many-to-many | MD00G073120 MD00G253200 MD17G003490 | 3 | |
| Tree-based ortholog | 1-to-1 | MD17G003490 | 1 | ||
| Anchor point | N/A | MD17G003490 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD17G003490 | 1 | ||
| Manihot esculenta | Orthologous gene family | many-to-many | ME12564G00020 ME12794G01670 | 2 | |
| Tree-based ortholog | 1-to-many | ME12794G01670 ME12564G00020 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME12564G00020 | 1 | ||
| Medicago truncatula | Orthologous gene family | many-to-1 | MT4G107400 | 1 | |
| Tree-based ortholog | 1-to-1 | MT4G107400 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT4G107400 | 1 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS03G48540 OS07G09520 OS12G44230 | 3 | |
| Tree-based ortholog | 1-to-many | OS07G09520 OS03G48540 OS12G44230 ... | 4 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS03G48540 | 1 | ||
| Physcomitrella patens | Orthologous gene family | many-to-many | PP00049G00090 PP00114G00660 | 2 | |
| Tree-based ortholog | 1-to-many | PP00049G00090 PP00395G00180 PP00114G00660 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00114G00660 PP00049G00090 | 2 | ||
| Populus trichocarpa | Orthologous gene family | many-to-many | PT15G06720 PT17G07580 | 2 | |
| Tree-based ortholog | 1-to-1 | PT17G07580 | 1 | ||
| Anchor point | N/A | PT17G07580 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT17G07580 | 1 | ||
| Prunus persica | Orthologous gene family | many-to-many | PPE_003G25220 PPE_005G18940 PPE_005G18950 | 3 | |
| Tree-based ortholog | 1-to-1 | PPE_003G25220 | 1 | ||
| Anchor point | N/A | PPE_003G25220 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_003G25220 | 1 | ||
| Ricinus communis | Orthologous gene family | many-to-many | RC29822G01250 RC30147G07190 RC30147G07200 | 3 | |
| Tree-based ortholog | 1-to-1 | RC29822G01250 | 1 | ||
| Anchor point | N/A | RC29822G01250 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29822G01250 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | many-to-many | SL03G113470 SL03G113490 SL06G071150 | 3 | |
| Tree-based ortholog | 1-to-many | SL06G071150 SL03G113490 | 2 | ||
| Anchor point | N/A | SL06G071150 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL03G113490 | 1 | ||
| Solanum tuberosum | Orthologous gene family | many-to-many | ST03G026810 ST03G026830 ST05G011680 ... | 5 | |
| Tree-based ortholog | 1-to-many | ST06G027180 ST03G026830 ST05G011680 ... | 4 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST03G026830 | 1 | ||
| Thellungiella parvula | Orthologous gene family | many-to-many | TP2G25810 TP5G29900 TP7G02100 | 3 | |
| Tree-based ortholog | 1-to-1 | TP7G02100 | 1 | ||
| Anchor point | N/A | TP7G02100 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP7G02100 | 1 | ||
| Theobroma cacao | Orthologous gene family | many-to-many | TC0003G07810 TC0003G07820 TC0004G07720 | 3 | |
| Tree-based ortholog | 1-to-1 | TC0004G07720 | 1 | ||
| Anchor point | N/A | TC0004G07720 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0004G07720 | 1 | ||
| Vitis vinifera | Orthologous gene family | many-to-many | VV01G12930 VV17G04430 | 2 | |
| Tree-based ortholog | 1-to-many | VV17G04430 VV01G12930 | 2 | ||
| Anchor point | N/A | VV17G04430 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV17G04430 | 1 | ||
| Zea mays | Orthologous gene family | many-to-many | ZM01G49260 ZM03G14030 ZM07G04070 | 3 | |
| Tree-based ortholog | 1-to-many | ZM07G04070 ZM01G49260 ZM03G14030 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM01G49260 | 1 |