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Integrative Orthology Viewer:
AT5G27540
(Arabidopsis thaliana)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Arabidopsis thaliana | Orthologous gene family | AT3G05310 AT3G63150 AT5G27540 | 3 |  |
| Tree-based ortholog | AT5G27540 | 1 | ||
| Anchor point | AT3G05310 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | AT5G27540 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | many-to-1 | ATR_00003G00060 | 1 | |
| Tree-based ortholog | 1-to-1 | ATR_00003G00060 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00003G00060 | 1 | ||
| Arabidopsis lyrata | Orthologous gene family | many-to-many | AL3G05150 AL5G34290 AL6G27720 | 3 | |
| Tree-based ortholog | 1-to-1 | AL6G27720 | 1 | ||
| Anchor point | 1-to-many | AL6G27720 AL3G05150 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL6G27720 | 1 | ||
| Beta vulgaris | Orthologous gene family | many-to-1 | BV4G04120 | 1 | |
| Tree-based ortholog | 1-to-1 | BV4G04120 | 1 | ||
| Anchor point | 1-to-1 | BV4G04120 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV4G04120 | 1 | ||
| Brassica rapa | Orthologous gene family | many-to-many | BR00G06000 BR02G35970 BR03G29920 ... | 7 | |
| Tree-based ortholog | 1-to-many | BR09G04030 BR09G03990 BR06G27660 ... | 4 | ||
| Anchor point | 1-to-many | BR09G03990 BR02G35970 BR06G27660 ... | 4 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR06G27660 | 1 | ||
| Capsella rubella | Orthologous gene family | many-to-many | CRU_003G04400 CRU_005G28340 CRU_006G24260 | 3 | |
| Tree-based ortholog | 1-to-1 | CRU_006G24260 | 1 | ||
| Anchor point | 1-to-many | CRU_003G04400 CRU_006G24260 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_006G24260 | 1 | ||
| Carica papaya | Orthologous gene family | many-to-many | CP00048G00430 CP00052G00290 | 2 | |
| Tree-based ortholog | 1-to-1 | CP00048G00430 | 1 | ||
| Anchor point | 1-to-1 | CP00048G00430 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00048G00430 | 1 | ||
| Chlamydomonas reinhardtii | Orthologous gene family | many-to-1 | CR08G04880 | 1 | |
| Tree-based ortholog | 1-to-1 | CR08G04880 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR08G04880 | 1 | ||
| Citrullus lanatus | Orthologous gene family | many-to-many | CL02G16090 CL09G06540 | 2 | |
| Tree-based ortholog | 1-to-1 | CL02G16090 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL02G16090 | 1 | ||
| Citrus sinensis | Orthologous gene family | many-to-many | CS00022G01460 CS00103G00710 | 2 | |
| Tree-based ortholog | 1-to-1 | CS00103G00710 | 1 | ||
| Anchor point | 1-to-1 | CS00103G00710 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00103G00710 | 1 | ||
| Cucumis melo | Orthologous gene family | many-to-many | CM00003G03940 CM00026G01600 | 2 | |
| Tree-based ortholog | 1-to-1 | CM00003G03940 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00003G03940 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | many-to-1 | EG0002G15770 | 1 | |
| Tree-based ortholog | 1-to-1 | EG0002G15770 | 1 | ||
| Anchor point | 1-to-1 | EG0002G15770 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0002G15770 | 1 | ||
| Fragaria vesca | Orthologous gene family | many-to-many | FV2G25180 FV6G05830 | 2 | |
| Tree-based ortholog | 1-to-1 | FV6G05830 | 1 | ||
| Anchor point | 1-to-1 | FV6G05830 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV6G05830 | 1 | ||
| Glycine max | Orthologous gene family | many-to-many | GM02G16650 GM03G30990 GM10G03170 ... | 6 | |
| Tree-based ortholog | 1-to-many | GM20G37730 GM10G29580 | 2 | ||
| Anchor point | 1-to-many | GM20G37730 GM10G29580 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM20G37730 GM10G29580 | 2 | ||
| Gossypium raimondii | Orthologous gene family | many-to-many | GR04G08050 GR04G24160 GR07G34260 | 3 | |
| Tree-based ortholog | 1-to-many | GR04G24160 GR07G34260 | 2 | ||
| Anchor point | 1-to-many | GR04G24160 GR07G34260 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR04G24160 | 1 | ||
| Lotus japonicus | Orthologous gene family | many-to-1 | LJ5G017940 | 1 | |
| Tree-based ortholog | 1-to-1 | LJ5G017940 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ5G017940 | 1 | ||
| Malus domestica | Orthologous gene family | many-to-many | MD00G399940 MD00G443660 MD03G023030 ... | 5 | |
| Tree-based ortholog | 1-to-many | MD12G022360 MD00G443660 | 2 | ||
| Anchor point | 1-to-1 | MD12G022350 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD11G026230 MD03G023030 | 2 | ||
| Manihot esculenta | Orthologous gene family | many-to-many | ME03614G04700 ME04457G01780 ME05175G00010 ... | 4 | |
| Tree-based ortholog | 1-to-many | ME03614G04700 ME05175G00010 | 2 | ||
| Anchor point | 1-to-1 | ME03614G04700 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ME05175G00010 ME03614G04700 | 2 | ||
| Medicago truncatula | Orthologous gene family | many-to-many | MT1G072280 MT1G082870 MT4G129310 ... | 8 | |
| Tree-based ortholog | 1-to-many | MT4G129890 MT4G129310 MT5G034580 ... | 6 | ||
| Anchor point | 1-to-1 | MT1G082870 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT1G082870 | 1 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS01G62570 OS03G59590 | 2 | |
| Tree-based ortholog | 1-to-many | OS01G62570 OS03G59590 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS03G59590 | 1 | ||
| Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL06G02920 | 1 | |
| Physcomitrella patens | Orthologous gene family | many-to-many | PP00095G00410 PP00197G00560 PP00249G00090 ... | 4 | |
| Tree-based ortholog | 1-to-many | PP00095G00410 PP00255G00140 PP00249G00090 ... | 4 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00249G00090 PP00255G00140 PP00197G00560 | 3 | ||
| Populus trichocarpa | Orthologous gene family | many-to-many | PT05G03370 PT05G20900 PT13G02310 | 3 | |
| Tree-based ortholog | 1-to-many | PT05G03370 PT13G02310 | 2 | ||
| Anchor point | 1-to-many | PT13G02310 PT05G03370 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT13G02310 PT05G03370 | 2 | ||
| Prunus persica | Orthologous gene family | many-to-many | PPE_006G33150 PPE_008G25540 | 2 | |
| Tree-based ortholog | 1-to-1 | PPE_006G33150 | 1 | ||
| Anchor point | 1-to-1 | PPE_006G33150 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_006G33150 | 1 | ||
| Ricinus communis | Orthologous gene family | many-to-many | RC29647G01010 RC30128G01610 | 2 | |
| Tree-based ortholog | 1-to-1 | RC30128G01610 | 1 | ||
| Anchor point | 1-to-1 | RC30128G01610 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29647G01010 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | many-to-many | SL01G098920 SL09G065130 | 2 | |
| Tree-based ortholog | 1-to-1 | SL01G098920 | 1 | ||
| Anchor point | 1-to-1 | SL01G098920 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL01G098920 | 1 | ||
| Solanum tuberosum | Orthologous gene family | many-to-many | ST01G036620 ST09G019830 | 2 | |
| Tree-based ortholog | 1-to-many | ST01G036620 ST01G036640 | 2 | ||
| Anchor point | 1-to-1 | ST01G036620 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST01G036620 | 1 | ||
| Thellungiella parvula | Orthologous gene family | many-to-many | TP2G20720 TP3G04170 TP5G00380 | 3 | |
| Tree-based ortholog | 1-to-1 | TP2G20720 | 1 | ||
| Anchor point | 1-to-many | TP2G20720 TP3G04170 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP2G20720 | 1 | ||
| Theobroma cacao | Orthologous gene family | many-to-many | TC0001G27870 TC0005G30230 | 2 | |
| Tree-based ortholog | 1-to-1 | TC0005G30230 | 1 | ||
| Anchor point | 1-to-1 | TC0005G30230 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0005G30230 | 1 | ||
| Vitis vinifera | Orthologous gene family | many-to-many | VV07G04590 VV14G00350 | 2 | |
| Tree-based ortholog | 1-to-1 | VV14G00350 | 1 | ||
| Anchor point | 1-to-1 | VV14G00350 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV14G00350 | 1 | ||
| Zea mays | Orthologous gene family | many-to-many | ZM01G57380 ZM05G01980 | 2 | |
| Tree-based ortholog | 1-to-many | ZM01G57380 ZM05G01980 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ZM01G57380 ZM05G01980 | 2 |