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Integrative Orthology Viewer:
AT5G25880
(Arabidopsis thaliana)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Arabidopsis thaliana | Orthologous gene family | AT1G79750 AT2G19900 AT5G11670 ... | 4 |  |
| Tree-based ortholog | AT5G25880 | 1 | ||
| Anchor point | AT5G11670 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | AT5G25880 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | many-to-1 | ATR_00056G00850 | 1 | |
| Tree-based ortholog | 1-to-1 | ATR_00056G00850 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00056G00850 | 1 | ||
| Arabidopsis lyrata | Orthologous gene family | many-to-many | AL2G30020 AL3G36270 AL6G11500 ... | 4 | |
| Tree-based ortholog | 1-to-1 | AL6G26060 | 1 | ||
| Anchor point | 1-to-many | AL6G11500 AL6G26060 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL6G11500 | 1 | ||
| Beta vulgaris | Orthologous gene family | many-to-many | BV0G49430 BV8G05330 | 2 | |
| Tree-based ortholog | 1-to-1 | BV8G05330 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV8G05330 | 1 | ||
| Brassica rapa | Orthologous gene family | many-to-many | BR02G05640 BR03G04470 BR06G26800 ... | 5 | |
| Tree-based ortholog | 1-to-1 | BR06G26800 | 1 | ||
| Anchor point | 1-to-many | BR02G05640 BR06G26800 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR06G26800 | 1 | ||
| Capsella rubella | Orthologous gene family | many-to-many | CRU_002G26300 CRU_003G32860 CRU_006G09900 ... | 4 | |
| Tree-based ortholog | 1-to-1 | CRU_006G22940 | 1 | ||
| Anchor point | 1-to-many | CRU_006G09900 CRU_006G22940 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_006G22940 | 1 | ||
| Carica papaya | Orthologous gene family | many-to-many | CP00007G02060 CP00040G00630 | 2 | |
| Tree-based ortholog | 1-to-1 | CP00007G02060 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00040G00630 | 1 | ||
| Chlamydomonas reinhardtii | Orthologous gene family | many-to-1 | CR06G00580 | 1 | |
| Tree-based ortholog | 1-to-many | CR01G04960 CR06G04510 CR06G00580 ... | 6 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR06G00580 | 1 | ||
| Citrullus lanatus | Orthologous gene family | many-to-many | CL00G06280 CL03G15830 CL07G12890 ... | 4 | |
| Tree-based ortholog | 1-to-1 | CL08G11870 | 1 | ||
| Anchor point | 1-to-1 | CL07G12890 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL07G12890 | 1 | ||
| Citrus sinensis | Orthologous gene family | many-to-many | CS00005G01270 CS00027G00460 CS00175G00130 | 3 | |
| Tree-based ortholog | 1-to-1 | CS00005G01270 | 1 | ||
| Anchor point | 1-to-1 | CS00005G01270 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00027G00460 | 1 | ||
| Cucumis melo | Orthologous gene family | many-to-many | CM00014G04930 CM00018G02330 CM00025G02000 ... | 4 | |
| Tree-based ortholog | 1-to-1 | CM00014G04930 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00014G04930 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | many-to-many | EG0003G04850 EG0003G08260 EG0003G29110 ... | 5 | |
| Tree-based ortholog | 1-to-many | EG0010G25040 EG0003G29110 EG0006G25860 | 3 | ||
| Anchor point | 1-to-many | EG0003G04850 EG0010G25040 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0010G25040 | 1 | ||
| Fragaria vesca | Orthologous gene family | many-to-many | FV0G35500 FV2G34830 FV6G15180 | 3 | |
| Tree-based ortholog | 1-to-1 | FV2G34830 | 1 | ||
| Anchor point | 1-to-1 | FV2G34830 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV2G34830 | 1 | ||
| Glycine max | Orthologous gene family | many-to-many | GM01G01180 GM04G09110 GM05G35800 ... | 10 | |
| Tree-based ortholog | 1-to-many | GM04G09110 GM06G09220 | 2 | ||
| Anchor point | 1-to-1 | GM04G09110 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GM05G35800 | 1 | ||
| Gossypium raimondii | Orthologous gene family | many-to-many | GR01G00890 GR01G02620 GR03G06180 ... | 6 | |
| Tree-based ortholog | 1-to-many | GR10G10510 GR01G02620 GR09G04860 | 3 | ||
| Anchor point | 1-to-many | GR03G06180 GR10G10510 GR11G07140 ... | 5 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR10G10510 | 1 | ||
| Lotus japonicus | Orthologous gene family | many-to-many | LJ1G028760 LJ3G032650 LJ4G048550 | 3 | |
| Tree-based ortholog | 1-to-1 | LJ1G028760 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ3G032650 | 1 | ||
| Malus domestica | Orthologous gene family | many-to-many | MD00G019210 MD00G112570 MD00G202240 ... | 12 | |
| Tree-based ortholog | 1-to-1 | MD00G112570 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD00G476920 MD00G357270 | 2 | ||
| Manihot esculenta | Orthologous gene family | many-to-many | ME00847G00520 ME05875G00040 ME07351G00220 ... | 4 | |
| Tree-based ortholog | 1-to-many | ME07351G00220 ME00847G00520 ME05875G00040 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME00847G00520 | 1 | ||
| Medicago truncatula | Orthologous gene family | many-to-many | MT2G101040 MT3G110330 MT8G014390 ... | 4 | |
| Tree-based ortholog | 1-to-1 | MT3G110330 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT3G110330 | 1 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS01G09320 OS01G52500 OS01G54030 ... | 4 | |
| Tree-based ortholog | 1-to-many | OS01G09320 OS05G09440 OS02G44550 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS05G09440 | 1 | ||
| Ostreococcus lucimarinus | Orthologous gene family | many-to-1 | OL06G03720 | 1 | |
| Tree-based ortholog | 1-to-many | OL04G03480 OL12G02710 OL07G01060 ... | 5 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL06G03720 | 1 | ||
| Physcomitrella patens | Orthologous gene family | many-to-many | PP00001G02520 PP00002G03170 PP00038G00240 | 3 | |
| Tree-based ortholog | 1-to-1 | PP00038G00220 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00038G00240 PP00002G03170 PP00001G02520 | 3 | ||
| Populus trichocarpa | Orthologous gene family | many-to-many | PT01G18970 PT03G04930 PT06G23650 ... | 5 | |
| Tree-based ortholog | 1-to-1 | PT01G09000 | 1 | ||
| Anchor point | 1-to-1 | PT06G23650 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT06G23650 PT18G04660 | 2 | ||
| Prunus persica | Orthologous gene family | many-to-many | PPE_001G44970 PPE_003G04500 PPE_007G24040 | 3 | |
| Tree-based ortholog | 1-to-1 | PPE_001G44970 | 1 | ||
| Anchor point | 1-to-many | PPE_003G04500 PPE_001G44970 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_001G44970 | 1 | ||
| Ricinus communis | Orthologous gene family | many-to-many | RC29794G01030 RC29912G01710 RC30146G00870 | 3 | |
| Tree-based ortholog | 1-to-1 | RC29794G01030 | 1 | ||
| Anchor point | 1-to-1 | RC29794G01030 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29912G01710 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | many-to-many | SL03G120990 SL05G050120 SL08G066360 ... | 5 | |
| Tree-based ortholog | 1-to-many | SL12G044600 SL03G120990 | 2 | ||
| Anchor point | 1-to-1 | SL03G120990 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL08G066360 | 1 | ||
| Solanum tuberosum | Orthologous gene family | many-to-many | ST03G035970 ST05G022450 ST08G015720 ... | 5 | |
| Tree-based ortholog | 1-to-many | ST12G022410 ST03G035970 | 2 | ||
| Anchor point | 1-to-1 | ST03G035970 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST08G015720 | 1 | ||
| Thellungiella parvula | Orthologous gene family | many-to-many | TP2G21770 TP3G33230 TP5G36030 ... | 4 | |
| Tree-based ortholog | 1-to-1 | TP2G21770 | 1 | ||
| Anchor point | 1-to-many | TP6G31940 TP2G21770 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP2G21770 | 1 | ||
| Theobroma cacao | Orthologous gene family | many-to-many | TC0008G08580 TC0009G04460 TC0009G27300 | 3 | |
| Tree-based ortholog | 1-to-1 | TC0009G04460 | 1 | ||
| Anchor point | 1-to-1 | TC0009G04460 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0009G04460 | 1 | ||
| Vitis vinifera | Orthologous gene family | many-to-many | VV02G01520 VV04G07400 VV09G04390 ... | 4 | |
| Tree-based ortholog | 1-to-many | VV09G04390 VV11G04560 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV11G04560 | 1 | ||
| Zea mays | Orthologous gene family | many-to-many | ZM03G02380 ZM03G32960 ZM06G20250 ... | 6 | |
| Tree-based ortholog | 1-to-many | ZM06G22390 ZM03G02380 ZM08G16350 ... | 5 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM03G32960 | 1 |