Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
AT5G24470
(Arabidopsis thaliana)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Arabidopsis thaliana | Orthologous gene family | AT5G24470 | 1 |  |
| Tree-based ortholog | AT5G24470 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | AT5G24470 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | 1-to-1 | ATR_00001G04830 | 1 | |
| Tree-based ortholog | 1-to-1 | ATR_00001G04830 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00001G04830 | 1 | ||
| Arabidopsis lyrata | Orthologous gene family | 1-to-1 | AL6G24540 | 1 | |
| Tree-based ortholog | 1-to-1 | AL6G24540 | 1 | ||
| Anchor point | N/A | AL6G24540 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL6G24540 | 1 | ||
| Beta vulgaris | Orthologous gene family | 1-to-1 | BV3G17150 | 1 | |
| Tree-based ortholog | 1-to-1 | BV3G17150 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV3G17150 | 1 | ||
| Brassica rapa | Orthologous gene family | 1-to-many | BR02G37310 BR06G25840 BR09G02920 | 3 | |
| Tree-based ortholog | 1-to-1 | BR02G37310 | 1 | ||
| Anchor point | N/A | BR02G37310 BR06G25840 BR09G02920 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR06G25840 | 1 | ||
| Capsella rubella | Orthologous gene family | 1-to-1 | CRU_006G21620 | 1 | |
| Tree-based ortholog | 1-to-1 | CRU_006G21620 | 1 | ||
| Anchor point | N/A | CRU_006G21620 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_006G21620 | 1 | ||
| Carica papaya | Orthologous gene family | 1-to-1 | CP00003G01560 | 1 | |
| Tree-based ortholog | 1-to-1 | CP00003G01560 | 1 | ||
| Anchor point | N/A | CP00003G01560 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00003G01560 | 1 | ||
| Chlamydomonas reinhardtii | Orthologous gene family | 1-to-1 | CR02G04720 | 1 | |
| Tree-based ortholog | 1-to-1 | CR16G11560 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR02G04720 | 1 | ||
| Citrullus lanatus | Orthologous gene family | 1-to-1 | CL00G07130 | 1 | |
| Tree-based ortholog | 1-to-1 | CL00G07130 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL00G07130 | 1 | ||
| Citrus sinensis | Orthologous gene family | 1-to-1 | CS00343G00040 | 1 | |
| Tree-based ortholog | 1-to-1 | CS00343G00040 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00343G00040 | 1 | ||
| Cucumis melo | Orthologous gene family | 1-to-1 | CM00005G09060 | 1 | |
| Tree-based ortholog | 1-to-1 | CM00005G09060 | 1 | ||
| Anchor point | N/A | CM00005G09060 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00005G09060 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | 1-to-1 | EG0001G11370 | 1 | |
| Tree-based ortholog | 1-to-1 | EG0001G11370 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0001G11370 | 1 | ||
| Fragaria vesca | Orthologous gene family | 1-to-1 | FV7G34830 | 1 | |
| Tree-based ortholog | 1-to-1 | FV7G34830 | 1 | ||
| Anchor point | N/A | FV7G34830 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV7G34830 | 1 | ||
| Glycine max | Orthologous gene family | 1-to-many | GM04G40640 GM06G14150 | 2 | |
| Tree-based ortholog | 1-to-many | GM06G14150 GM04G40640 | 2 | ||
| Anchor point | N/A | GM06G14150 GM04G40640 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM06G14150 GM04G40640 | 2 | ||
| Gossypium raimondii | Orthologous gene family | 1-to-many | GR07G01710 GR08G26510 GR12G00100 | 3 | |
| Tree-based ortholog | 1-to-1 | GR13G15840 | 1 | ||
| Anchor point | N/A | GR12G00100 GR08G26510 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR12G00100 | 1 | ||
| Lotus japonicus | Tree-based ortholog | 1-to-many | LJ1G075070 LJ3G035070 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ1G075070 | 1 | ||
| Malus domestica | Orthologous gene family | 1-to-many | MD00G264810 MD01G022590 MD07G020690 | 3 | |
| Tree-based ortholog | 1-to-many | MD07G020690 MD00G264810 | 2 | ||
| Anchor point | N/A | MD07G020690 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD07G020690 | 1 | ||
| Manihot esculenta | Orthologous gene family | 1-to-1 | ME00069G00210 | 1 | |
| Tree-based ortholog | 1-to-1 | ME00069G00210 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME00069G00210 | 1 | ||
| Medicago truncatula | Orthologous gene family | 1-to-1 | MT3G092780 | 1 | |
| Tree-based ortholog | 1-to-1 | MT3G092780 | 1 | ||
| Anchor point | N/A | MT3G092780 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT3G092780 | 1 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | 1-to-many | OS09G36220 OS11G05930 | 2 | |
| Tree-based ortholog | 1-to-1 | OS09G36220 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS09G36220 | 1 | ||
| Ostreococcus lucimarinus | Orthologous gene family | 1-to-1 | OL10G03420 | 1 | |
| Tree-based ortholog | 1-to-many | OL13G01710 OL21G01270 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL10G03420 | 1 | ||
| Physcomitrella patens | Tree-based ortholog | 1-to-1 | PP00081G00620 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00412G00120 PP00412G00180 PP00081G00680 ... | 4 | ||
| Populus trichocarpa | Orthologous gene family | 1-to-many | PT12G00590 PT15G00230 | 2 | |
| Tree-based ortholog | 1-to-many | PT15G00230 PT12G00590 | 2 | ||
| Anchor point | N/A | PT15G00230 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT15G00230 PT12G00590 | 2 | ||
| Prunus persica | Orthologous gene family | 1-to-1 | PPE_002G30510 | 1 | |
| Tree-based ortholog | 1-to-1 | PPE_002G30510 | 1 | ||
| Anchor point | N/A | PPE_002G30510 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_002G30510 | 1 | ||
| Ricinus communis | Orthologous gene family | 1-to-1 | RC29866G00160 | 1 | |
| Tree-based ortholog | 1-to-1 | RC29866G00160 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29866G00160 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | 1-to-1 | SL03G081240 | 1 | |
| Tree-based ortholog | 1-to-1 | SL03G081240 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL10G005030 | 1 | ||
| Solanum tuberosum | Orthologous gene family | 1-to-1 | ST03G016990 | 1 | |
| Tree-based ortholog | 1-to-1 | ST03G016990 | 1 | ||
| Anchor point | N/A | ST03G016990 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST10G006620 | 1 | ||
| Thellungiella parvula | Orthologous gene family | 1-to-1 | TP2G22860 | 1 | |
| Tree-based ortholog | 1-to-1 | TP2G22860 | 1 | ||
| Anchor point | N/A | TP2G22860 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP2G22860 | 1 | ||
| Theobroma cacao | Orthologous gene family | 1-to-1 | TC0003G20850 | 1 | |
| Tree-based ortholog | 1-to-1 | TC0003G20850 | 1 | ||
| Anchor point | N/A | TC0003G20850 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0003G20850 | 1 | ||
| Vitis vinifera | Orthologous gene family | 1-to-1 | VV16G09830 | 1 | |
| Tree-based ortholog | 1-to-many | VV15G07480 VV16G09830 | 2 | ||
| Anchor point | N/A | VV16G09830 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV16G09830 | 1 | ||
| Zea mays | Orthologous gene family | 1-to-many | ZM02G34100 ZM07G20370 | 2 | |
| Tree-based ortholog | 1-to-many | ZM07G20370 ZM02G34100 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ZM07G20370 ZM02G34100 | 2 |