Integrative Orthology Viewer: AT5G20830 (Arabidopsis thaliana)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Arabidopsis thaliana | Orthologous gene family | AT3G43190 AT4G02280 AT5G20830 ... | 4 | |
Tree-based ortholog | AT5G20830 | 1 | ||
Anchor point | AT3G43190 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | AT5G20830 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | many-to-many | ATR_00044G00210 ATR_00106G00050 | 2 | |
Tree-based ortholog | 1-to-1 | ATR_00106G00050 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00106G00050 | 1 | ||
Arabidopsis lyrata | Orthologous gene family | many-to-many | AL5G10860 AL6G21110 AL6G39130 ... | 4 | |
Tree-based ortholog | 1-to-1 | AL6G21110 | 1 | ||
Anchor point | 1-to-many | AL6G21110 AL5G10860 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL6G21110 | 1 | ||
Beta vulgaris | Orthologous gene family | many-to-many | BV0G61240 BV7G06330 BV8G14640 | 3 | |
Tree-based ortholog | 1-to-1 | BV7G06330 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV7G06330 | 1 | ||
Brassica rapa | Orthologous gene family | many-to-many | BR03G09140 BR06G31240 BR09G00570 ... | 4 | |
Tree-based ortholog | 1-to-many | BR10G14510 BR03G09140 | 2 | ||
Anchor point | 1-to-many | BR03G09140 BR10G14510 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR03G09140 | 1 | ||
Capsella rubella | Orthologous gene family | many-to-many | CRU_005G08390 CRU_006G18600 CRU_006G33680 ... | 4 | |
Tree-based ortholog | 1-to-1 | CRU_006G18600 | 1 | ||
Anchor point | 1-to-many | CRU_006G18600 CRU_005G08390 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_006G18600 | 1 | ||
Carica papaya | Orthologous gene family | many-to-many | CP00050G01590 CP00082G00590 CP29609G00010 | 3 | |
Tree-based ortholog | 1-to-1 | CP00082G00590 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00082G00590 | 1 | ||
Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR12G08850 | 1 | |
Citrullus lanatus | Orthologous gene family | many-to-many | CL03G14460 CL10G09330 | 2 | |
Tree-based ortholog | 1-to-1 | CL03G14460 | 1 | ||
Anchor point | 1-to-1 | CL03G14460 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL03G14460 | 1 | ||
Citrus sinensis | Orthologous gene family | many-to-many | CS00001G07230 CS00013G01880 CS00013G01940 ... | 5 | |
Tree-based ortholog | 1-to-many | CS00013G01940 CS00013G01880 | 2 | ||
Anchor point | 1-to-1 | CS00013G01880 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00013G01880 | 1 | ||
Cucumis melo | Orthologous gene family | many-to-many | CM00025G03510 CM00031G04200 | 2 | |
Tree-based ortholog | 1-to-1 | CM00025G03510 | 1 | ||
Anchor point | 1-to-1 | CM00025G03510 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00025G03510 | 1 | ||
Eucalyptus grandis | Orthologous gene family | many-to-many | EG0002G13030 EG0003G06240 EG0003G25130 ... | 9 | |
Tree-based ortholog | 1-to-many | EG0008G28430 EG0008G28350 EG0003G06240 ... | 10 | ||
Anchor point | 1-to-many | EG0003G06240 EG0003G25130 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | EG0003G06240 EG0003G25130 | 2 | ||
Fragaria vesca | Orthologous gene family | many-to-many | FV0G36930 FV1G11030 FV1G28010 ... | 5 | |
Tree-based ortholog | 1-to-many | FV1G11030 FV0G36930 | 2 | ||
Anchor point | 1-to-1 | FV1G11030 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV1G11030 | 1 | ||
Glycine max | Orthologous gene family | many-to-many | GM02G40740 GM03G37441 GM09G08550 ... | 11 | |
Tree-based ortholog | 1-to-many | GM13G17421 GM17G05067 GM15G20180 ... | 4 | ||
Anchor point | 1-to-many | GM09G08550 GM13G17421 GM17G05067 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM13G17421 GM17G05067 | 2 | ||
Gossypium raimondii | Orthologous gene family | many-to-many | GR01G01770 GR01G08340 GR04G14270 ... | 8 | |
Tree-based ortholog | 1-to-many | GR10G09180 GR01G01770 GR10G09230 ... | 5 | ||
Anchor point | 1-to-many | GR09G03800 GR01G01770 GR10G09180 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR09G03800 | 1 | ||
Lotus japonicus | Orthologous gene family | many-to-many | LJ1G071120 LJ2G008390 LJ2G040640 ... | 6 | |
Tree-based ortholog | 1-to-many | LJ4G037180 LJ6G015350 | 2 | ||
Anchor point | 1-to-1 | LJ4G037180 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ4G037180 | 1 | ||
Malus domestica | Orthologous gene family | many-to-many | MD00G058090 MD00G251030 MD00G280860 ... | 14 | |
Tree-based ortholog | 1-to-many | MD00G343740 MD10G015210 MD02G008330 ... | 7 | ||
Anchor point | 1-to-1 | MD15G015750 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD10G015210 MD15G015750 MD00G343740 | 3 | ||
Manihot esculenta | Orthologous gene family | many-to-many | ME01945G00600 ME03264G00460 ME03975G00190 ... | 6 | |
Tree-based ortholog | 1-to-many | ME10114G00140 ME03975G00190 | 2 | ||
Anchor point | 1-to-1 | ME10114G00140 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ME10114G00140 ME03975G00190 | 2 | ||
Medicago truncatula | Orthologous gene family | many-to-many | MT1G088170 MT2G044070 MT3G064610 ... | 7 | |
Tree-based ortholog | 1-to-many | MT4G124660 MT2G044070 | 2 | ||
Anchor point | 1-to-many | MT2G044070 MT4G124660 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT4G124660 | 1 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS02G58480 OS03G22120 OS03G28330 ... | 5 | |
Tree-based ortholog | 1-to-many | OS06G09450 OS03G28330 OS07G42490 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS06G09450 | 1 | ||
Physcomitrella patens | Orthologous gene family | many-to-many | PP00028G02030 PP00093G00500 PP00120G00370 ... | 4 | |
Tree-based ortholog | 1-to-many | PP00028G02030 PP00120G00370 PP00303G00240 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00120G00370 PP00303G00240 PP00028G02030 | 3 | ||
Populus trichocarpa | Orthologous gene family | many-to-many | PT02G20230 PT06G13670 PT12G03720 ... | 6 | |
Tree-based ortholog | 1-to-many | PT06G13670 PT18G06350 | 2 | ||
Anchor point | 1-to-1 | PT06G13670 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT18G06350 PT06G13670 | 2 | ||
Prunus persica | Orthologous gene family | many-to-many | PPE_001G12360 PPE_001G12370 PPE_003G00150 ... | 6 | |
Tree-based ortholog | 1-to-1 | PPE_007G21230 | 1 | ||
Anchor point | 1-to-1 | PPE_007G21230 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_007G21230 | 1 | ||
Ricinus communis | Orthologous gene family | many-to-many | RC29660G00140 RC29726G01950 RC29739G01280 ... | 4 | |
Tree-based ortholog | 1-to-1 | RC29739G01280 | 1 | ||
Anchor point | 1-to-1 | RC29739G01280 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29739G01280 | 1 | ||
Solanum lycopersicum | Orthologous gene family | many-to-many | SL02G081300 SL07G042520 SL07G042550 ... | 5 | |
Tree-based ortholog | 1-to-many | SL12G040700 SL07G042520 SL07G042550 ... | 4 | ||
Anchor point | 1-to-1 | SL12G009300 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL12G009300 | 1 | ||
Solanum tuberosum | Orthologous gene family | many-to-many | ST07G016110 ST12G008670 | 2 | |
Tree-based ortholog | 1-to-many | ST07G016110 ST12G008670 | 2 | ||
Anchor point | 1-to-many | ST12G008670 ST07G016110 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST12G008670 | 1 | ||
Thellungiella parvula | Orthologous gene family | many-to-many | TP2G19540 TP5G18650 TP6G02170 ... | 4 | |
Tree-based ortholog | 1-to-1 | TP6G23700 | 1 | ||
Anchor point | 1-to-1 | TP6G23700 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP6G23700 | 1 | ||
Theobroma cacao | Orthologous gene family | many-to-many | TC0001G30220 TC0003G07290 TC0004G29030 ... | 5 | |
Tree-based ortholog | 1-to-many | TC0009G06730 TC0009G06690 | 2 | ||
Anchor point | 1-to-1 | TC0009G06690 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0009G06690 | 1 | ||
Vitis vinifera | Orthologous gene family | many-to-many | VV05G12420 VV07G08620 VV11G02020 ... | 4 | |
Tree-based ortholog | 1-to-1 | VV11G02020 | 1 | ||
Anchor point | 1-to-1 | VV11G02020 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV11G02020 | 1 | ||
Zea mays | Orthologous gene family | many-to-many | ZM01G14880 ZM01G14910 ZM04G24420 ... | 6 | |
Tree-based ortholog | 1-to-many | ZM09G02340 ZM09G19380 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM09G02340 | 1 |