Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
AT5G20340
(Arabidopsis thaliana)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Arabidopsis thaliana | Orthologous gene family | AT1G33220 AT5G20330 AT5G20340 ... | 4 |  |
| Best-Hits-and-Inparalogs(BHI)family | AT5G20340 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | many-to-1 | ATR_00156G00070 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00156G00070 | 1 | ||
| Arabidopsis lyrata | Orthologous gene family | many-to-many | AL3G28990 AL6G20640 AL6G20850 ... | 4 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL6G20650 | 1 | ||
| Beta vulgaris | Orthologous gene family | many-to-1 | BV9G19340 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV9G19340 | 1 | ||
| Brassica rapa | Orthologous gene family | many-to-many | BR02G10130 BR10G14720 BR10G14870 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | BR10G14870 BR02G10130 | 2 | ||
| Capsella rubella | Orthologous gene family | many-to-many | CRU_001G29940 CRU_006G18360 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_001G29940 | 1 | ||
| Carica papaya | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | CP00049G01230 CP00049G01220 | 2 | |
| Citrullus lanatus | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL11G09590 | 1 | |
| Citrus sinensis | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00004G01390 | 1 | |
| Cucumis melo | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00044G01670 | 1 | |
| Eucalyptus grandis | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | EG0002G18910 EG0002G18920 EG0002G18930 | 3 | |
| Fragaria vesca | Orthologous gene family | many-to-many | FV1G10110 FV7G16700 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | FV7G16700 FV1G10110 | 2 | ||
| Glycine max | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GM06G11390 | 1 | |
| Gossypium raimondii | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR04G25770 | 1 | |
| Lotus japonicus | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ4G010940 | 1 | |
| Malus domestica | Orthologous gene family | many-to-many | MD00G034300 MD00G337010 MD15G016490 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD00G034300 MD15G016490 | 2 | ||
| Manihot esculenta | Orthologous gene family | many-to-1 | ME06350G00020 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME06350G00020 | 1 | ||
| Medicago truncatula | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MT7G081350 MT7G081370 | 2 | |
| Oryza sativa ssp. japonica | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | OS05G41610 OS01G58730 | 2 | |
| Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00270G00470 PP00053G00310 PP00070G01270 ... | 11 | |
| Populus trichocarpa | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT02G08920 | 1 | |
| Prunus persica | Orthologous gene family | many-to-many | PPE_007G22040 PPE_007G22050 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PPE_007G22050 PPE_007G22040 | 2 | ||
| Ricinus communis | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29908G00720 | 1 | |
| Solanum lycopersicum | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL03G025650 | 1 | |
| Solanum tuberosum | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST03G014160 | 1 | |
| Thellungiella parvula | Orthologous gene family | many-to-many | TP4G04300 TP6G23920 TP6G24090 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP6G24090 | 1 | ||
| Theobroma cacao | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0003G30050 | 1 | |
| Vitis vinifera | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV02G02090 | 1 | |
| Zea mays | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM08G33390 | 1 | |