Integrative Orthology Viewer: AT5G20320 (Arabidopsis thaliana)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Arabidopsis thaliana | Orthologous gene family | AT3G03300 AT5G20320 | 2 | |
Tree-based ortholog | AT5G20320 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | AT5G20320 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | many-to-1 | ATR_00016G03530 | 1 | |
Tree-based ortholog | 1-to-1 | ATR_00026G00150 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00026G00150 | 1 | ||
Arabidopsis lyrata | Tree-based ortholog | 1-to-1 | AL6G20620 | 1 | |
Anchor point | N/A | AL6G20620 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL6G20620 | 1 | ||
Beta vulgaris | Orthologous gene family | many-to-1 | BV8G16240 | 1 | |
Tree-based ortholog | 1-to-many | BV8G16230 BV8G16240 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | BV8G16230 BV8G16240 | 2 | ||
Brassica rapa | Tree-based ortholog | 1-to-1 | BR10G14890 | 1 | |
Anchor point | N/A | BR10G14890 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR10G14890 | 1 | ||
Capsella rubella | Orthologous gene family | many-to-1 | CRU_003G02350 | 1 | |
Tree-based ortholog | 1-to-1 | CRU_006G18200 | 1 | ||
Anchor point | N/A | CRU_006G18200 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_006G18200 | 1 | ||
Carica papaya | Tree-based ortholog | 1-to-1 | CP00397G00010 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP36105G00010 | 1 | ||
Chlamydomonas reinhardtii | Tree-based ortholog | 1-to-many | CR02G13390 CR16G12300 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR02G13390 | 1 | ||
Citrullus lanatus | Orthologous gene family | many-to-1 | CL06G12680 | 1 | |
Tree-based ortholog | 1-to-1 | CL06G12680 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL06G12680 | 1 | ||
Citrus sinensis | Orthologous gene family | many-to-many | CS00068G00330 CS00367G00030 | 2 | |
Tree-based ortholog | 1-to-1 | CS00068G00330 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00068G00330 | 1 | ||
Cucumis melo | Tree-based ortholog | 1-to-1 | CM00012G02760 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00012G02760 | 1 | ||
Eucalyptus grandis | Orthologous gene family | many-to-1 | EG0003G03340 | 1 | |
Tree-based ortholog | 1-to-1 | EG0003G03340 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0003G03340 | 1 | ||
Fragaria vesca | Orthologous gene family | many-to-1 | FV6G00110 | 1 | |
Tree-based ortholog | 1-to-1 | FV1G03450 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV1G03450 | 1 | ||
Glycine max | Orthologous gene family | many-to-many | GM09G02920 GM09G02930 GM13G22450 ... | 4 | |
Tree-based ortholog | 1-to-many | GM13G22450 GM17G11235 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM17G11235 GM13G22450 | 2 | ||
Gossypium raimondii | Orthologous gene family | many-to-many | GR02G14300 GR09G05330 GR09G37490 | 3 | |
Tree-based ortholog | 1-to-1 | GR09G05330 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR09G05330 | 1 | ||
Lotus japonicus | Tree-based ortholog | 1-to-many | LJ6G020240 LJ6G020230 LJ1G025270 ... | 4 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | LJ6G020230 LJ6G020240 | 2 | ||
Malus domestica | Tree-based ortholog | 1-to-many | MD00G393190 MD15G008920 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD15G008920 MD00G393190 | 2 | ||
Manihot esculenta | Tree-based ortholog | 1-to-1 | ME08686G00170 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME08686G00170 | 1 | ||
Medicago truncatula | Orthologous gene family | many-to-many | MT1G060740 MT2G030490 MT4G116860 | 3 | |
Tree-based ortholog | 1-to-1 | MT4G116860 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT4G116860 | 1 | ||
Oryza sativa ssp. japonica | Tree-based ortholog | 1-to-1 | OS04G43050 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS04G43050 | 1 | ||
Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL07G03250 | 1 | |
Physcomitrella patens | Tree-based ortholog | 1-to-1 | PP00149G00220 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PP00149G00220 | 1 | ||
Populus trichocarpa | Orthologous gene family | many-to-many | PT06G18880 PT08G07590 PT10G18140 | 3 | |
Tree-based ortholog | 1-to-1 | PT06G18880 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT06G18880 | 1 | ||
Prunus persica | Orthologous gene family | many-to-1 | PPE_006G36590 | 1 | |
Tree-based ortholog | 1-to-1 | PPE_007G26950 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_007G26950 | 1 | ||
Ricinus communis | Orthologous gene family | many-to-many | RC29737G00420 RC29929G00470 | 2 | |
Tree-based ortholog | 1-to-1 | RC29737G00420 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29737G00420 | 1 | ||
Solanum lycopersicum | Orthologous gene family | many-to-many | SL06G048960 SL07G005030 SL11G008520 ... | 4 | |
Tree-based ortholog | 1-to-1 | SL07G005030 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL07G005030 | 1 | ||
Solanum tuberosum | Orthologous gene family | many-to-many | ST06G012900 ST07G007080 ST11G010160 | 3 | |
Tree-based ortholog | 1-to-1 | ST07G007080 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST07G007080 | 1 | ||
Thellungiella parvula | Tree-based ortholog | 1-to-1 | TP6G24100 | 1 | |
Anchor point | N/A | TP6G24100 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP6G24100 | 1 | ||
Theobroma cacao | Orthologous gene family | many-to-many | TC0005G18820 TC0009G03480 | 2 | |
Tree-based ortholog | 1-to-1 | TC0009G03480 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0009G03480 | 1 | ||
Vitis vinifera | Orthologous gene family | many-to-many | VV04G02970 VV11G00090 | 2 | |
Tree-based ortholog | 1-to-1 | VV11G00090 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV11G00090 | 1 | ||
Zea mays | Tree-based ortholog | 1-to-many | ZM05G08380 ZM05G08390 ZM01G41740 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM01G41740 | 1 |