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Integrative Orthology Viewer:
AT5G20280
(Arabidopsis thaliana)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Arabidopsis thaliana | Orthologous gene family | AT1G04920 AT4G10120 AT5G11110 ... | 4 |  |
| Tree-based ortholog | AT5G20280 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | AT5G20280 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | many-to-many | ATR_00033G01740 ATR_00099G00850 | 2 | |
| Tree-based ortholog | 1-to-1 | ATR_00033G01740 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00033G01740 | 1 | ||
| Arabidopsis lyrata | Orthologous gene family | many-to-many | AL1G04360 AL6G10890 AL6G20580 ... | 4 | |
| Tree-based ortholog | 1-to-1 | AL6G20580 | 1 | ||
| Anchor point | N/A | AL6G20580 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL6G20580 | 1 | ||
| Beta vulgaris | Orthologous gene family | many-to-many | BV2G10950 BV8G01860 | 2 | |
| Tree-based ortholog | 1-to-1 | BV8G01860 | 1 | ||
| Anchor point | N/A | BV8G01860 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV8G01860 | 1 | ||
| Brassica rapa | Orthologous gene family | many-to-many | BR02G10090 BR02G27590 BR03G04300 ... | 6 | |
| Tree-based ortholog | 1-to-many | BR02G10090 BR10G14930 | 2 | ||
| Anchor point | N/A | BR02G10090 BR10G14930 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR10G14930 | 1 | ||
| Capsella rubella | Orthologous gene family | many-to-many | CRU_001G03820 CRU_006G09370 CRU_006G27650 | 3 | |
| Tree-based ortholog | 1-to-1 | CRU_006G09370 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_006G09370 | 1 | ||
| Carica papaya | Orthologous gene family | many-to-many | CP00046G00590 CP00083G00220 CP00142G00090 | 3 | |
| Tree-based ortholog | 1-to-many | CP00217G00190 CP00046G00590 | 2 | ||
| Anchor point | N/A | CP00046G00590 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00046G00590 | 1 | ||
| Chlamydomonas reinhardtii | Orthologous gene family | many-to-1 | CR12G08850 | 1 | |
| Tree-based ortholog | 1-to-1 | CR12G08850 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR12G08850 | 1 | ||
| Citrullus lanatus | Orthologous gene family | many-to-many | CL06G08010 CL06G12180 CL11G02220 | 3 | |
| Tree-based ortholog | 1-to-1 | CL06G12180 | 1 | ||
| Anchor point | N/A | CL06G12180 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL06G12180 | 1 | ||
| Citrus sinensis | Orthologous gene family | many-to-many | CS00013G00520 CS00051G00890 CS00603G00040 ... | 4 | |
| Tree-based ortholog | 1-to-many | CS00051G00890 CS00013G00520 | 2 | ||
| Anchor point | N/A | CS00013G00520 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00013G00520 | 1 | ||
| Cucumis melo | Orthologous gene family | many-to-many | CM00008G00370 CM00012G03260 CM00043G00180 | 3 | |
| Tree-based ortholog | 1-to-many | CM00083G00390 CM00012G03260 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00012G03260 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | many-to-many | EG0003G13620 EG0005G26580 EG0006G24480 ... | 4 | |
| Tree-based ortholog | 1-to-many | EG0005G26600 EG0003G13620 EG0005G26580 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0005G26580 | 1 | ||
| Fragaria vesca | Orthologous gene family | many-to-many | FV1G04720 FV2G16260 FV2G39700 ... | 5 | |
| Tree-based ortholog | 1-to-many | FV2G04110 FV1G04720 FV2G39700 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV1G04720 | 1 | ||
| Glycine max | Orthologous gene family | many-to-many | GM06G48200 GM08G42140 GM13G23060 ... | 6 | |
| Tree-based ortholog | 1-to-many | GM02G29910 GM13G23060 GM17G11820 | 3 | ||
| Anchor point | N/A | GM17G11820 GM13G23060 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM17G11820 GM13G23060 | 2 | ||
| Gossypium raimondii | Orthologous gene family | many-to-many | GR04G29280 GR09G26210 GR10G11610 ... | 5 | |
| Tree-based ortholog | 1-to-many | GR04G29280 GR10G11610 | 2 | ||
| Anchor point | N/A | GR13G23590 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR13G23590 | 1 | ||
| Lotus japonicus | Orthologous gene family | many-to-1 | LJ4G032280 | 1 | |
| Tree-based ortholog | 1-to-1 | LJ4G032280 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ4G032280 | 1 | ||
| Malus domestica | Orthologous gene family | many-to-many | MD00G162790 MD00G368160 MD00G368170 ... | 10 | |
| Tree-based ortholog | 1-to-many | MD11G015380 MD02G022030 MD00G014260 ... | 10 | ||
| Anchor point | N/A | MD02G002480 MD15G009550 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD02G002480 MD00G368170 | 2 | ||
| Manihot esculenta | Orthologous gene family | many-to-many | ME00847G01780 ME03332G01160 ME07595G00060 ... | 5 | |
| Tree-based ortholog | 1-to-many | ME00847G01780 ME12793G00070 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME12793G00070 | 1 | ||
| Medicago truncatula | Orthologous gene family | many-to-many | MT3G047380 MT4G115620 MT5G091340 | 3 | |
| Tree-based ortholog | 1-to-1 | MT4G115620 | 1 | ||
| Anchor point | N/A | MT4G115620 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT4G115620 | 1 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS01G69030 OS02G09170 OS06G43630 ... | 4 | |
| Tree-based ortholog | 1-to-many | OS02G09170 OS06G43630 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS08G20660 | 1 | ||
| Physcomitrella patens | Orthologous gene family | many-to-1 | PP00131G00600 | 1 | |
| Tree-based ortholog | 1-to-many | PP00131G00600 PP00066G01210 PP00131G00030 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00066G01210 PP00131G00600 | 2 | ||
| Populus trichocarpa | Orthologous gene family | many-to-many | PT01G31760 PT06G06430 PT13G09550 ... | 6 | |
| Tree-based ortholog | 1-to-many | PT18G02510 PT18G12470 PT06G06430 | 3 | ||
| Anchor point | N/A | PT18G12470 PT06G06430 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT18G12470 PT06G06430 | 2 | ||
| Prunus persica | Orthologous gene family | many-to-many | PPE_001G15320 PPE_001G48780 PPE_007G26680 | 3 | |
| Tree-based ortholog | 1-to-1 | PPE_007G26680 | 1 | ||
| Anchor point | N/A | PPE_007G26680 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_007G26680 | 1 | ||
| Ricinus communis | Orthologous gene family | many-to-many | RC28543G00010 RC29848G01540 RC29904G00170 ... | 4 | |
| Tree-based ortholog | 1-to-many | RC50675G00010 RC28543G00010 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC28543G00010 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | many-to-many | SL07G007790 SL08G042000 SL11G045110 | 3 | |
| Tree-based ortholog | 1-to-1 | SL07G007790 | 1 | ||
| Anchor point | N/A | SL07G007790 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL07G007790 | 1 | ||
| Solanum tuberosum | Orthologous gene family | many-to-many | ST07G008720 ST08G013470 ST09G029260 ... | 4 | |
| Tree-based ortholog | 1-to-many | ST05G020320 ST07G008720 | 2 | ||
| Anchor point | N/A | ST07G008720 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST07G008720 | 1 | ||
| Thellungiella parvula | Orthologous gene family | many-to-many | TP1G03760 TP2G22240 TP6G07300 ... | 5 | |
| Tree-based ortholog | 1-to-1 | TP6G24130 | 1 | ||
| Anchor point | N/A | TP6G24130 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP6G24130 | 1 | ||
| Theobroma cacao | Orthologous gene family | many-to-many | TC0004G20380 TC0008G16750 TC0009G02110 ... | 4 | |
| Tree-based ortholog | 1-to-1 | TC0009G02110 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0009G12890 | 1 | ||
| Vitis vinifera | Orthologous gene family | many-to-many | VV04G12380 VV05G06550 VV11G01160 ... | 4 | |
| Tree-based ortholog | 1-to-many | VV18G17610 VV18G16140 VV04G12380 ... | 4 | ||
| Anchor point | N/A | VV11G01160 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV11G01160 | 1 | ||
| Zea mays | Orthologous gene family | many-to-many | ZM03G22980 ZM04G03320 ZM04G11990 ... | 4 | |
| Tree-based ortholog | 1-to-many | ZM05G21630 ZM09G14430 ZM06G12830 ... | 4 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM04G11990 | 1 |