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Integrative Orthology Viewer:
AT5G19000
(Arabidopsis thaliana)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Arabidopsis thaliana | Orthologous gene family | AT5G19000 AT5G21010 | 2 |  |
| Tree-based ortholog | AT5G19000 | 1 | ||
| Anchor point | AT3G06190 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | AT5G19000 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Tree-based ortholog | 1-to-1 | ATR_00025G01030 | 1 | |
| Anchor point | 1-to-1 | ATR_00025G01030 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00025G01030 | 1 | ||
| Arabidopsis lyrata | Tree-based ortholog | 1-to-1 | AL6G19130 | 1 | |
| Anchor point | 1-to-many | AL3G06240 AL6G19130 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL6G19130 | 1 | ||
| Beta vulgaris | Orthologous gene family | many-to-1 | BV0G27730 | 1 | |
| Tree-based ortholog | 1-to-many | BV0G27720 BV0G27730 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | BV0G27720 BV0G27730 | 2 | ||
| Brassica rapa | Orthologous gene family | many-to-many | BR01G40390 BR02G34190 BR03G08280 | 3 | |
| Tree-based ortholog | 1-to-many | BR03G08280 BR10G15810 | 2 | ||
| Anchor point | 1-to-many | BR03G08280 BR10G15810 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | BR03G08280 BR10G15810 | 2 | ||
| Capsella rubella | Tree-based ortholog | 1-to-1 | CRU_006G16880 | 1 | |
| Anchor point | 1-to-many | CRU_006G16880 CRU_003G05400 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_006G16880 | 1 | ||
| Carica papaya | Tree-based ortholog | 1-to-many | CP00050G01430 CP00016G00430 | 2 | |
| Anchor point | 1-to-1 | CP00016G00430 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00016G00430 | 1 | ||
| Chlamydomonas reinhardtii | Tree-based ortholog | 1-to-many | CR03G00300 CR01G02160 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR03G00300 | 1 | ||
| Citrullus lanatus | Tree-based ortholog | 1-to-1 | CL05G06160 | 1 | |
| Anchor point | 1-to-1 | CL05G06160 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL05G06160 | 1 | ||
| Citrus sinensis | Orthologous gene family | many-to-1 | CS00029G01310 | 1 | |
| Tree-based ortholog | 1-to-many | CS00011G01790 CS00022G01860 | 2 | ||
| Anchor point | 1-to-1 | CS00011G01790 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00011G01790 | 1 | ||
| Cucumis melo | Tree-based ortholog | 1-to-many | CM00006G06770 CM00047G02700 | 2 | |
| Anchor point | 1-to-many | CM00047G02700 CM00006G06770 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00006G06770 | 1 | ||
| Eucalyptus grandis | Tree-based ortholog | 1-to-1 | EG0011G28760 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0011G28760 | 1 | ||
| Fragaria vesca | Orthologous gene family | many-to-1 | FV4G15830 | 1 | |
| Tree-based ortholog | 1-to-1 | FV2G25680 | 1 | ||
| Anchor point | 1-to-1 | FV4G15830 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV4G15830 | 1 | ||
| Glycine max | Orthologous gene family | many-to-many | GM14G05000 GM16G04060 GM19G29420 | 3 | |
| Tree-based ortholog | 1-to-many | GM03G30740 GM19G33590 GM02G16840 ... | 4 | ||
| Anchor point | 1-to-many | GM19G33590 GM03G30740 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM02G16840 GM10G02940 GM19G33590 ... | 4 | ||
| Gossypium raimondii | Tree-based ortholog | 1-to-many | GR05G03570 GR04G21530 GR04G05510 ... | 4 | |
| Anchor point | 1-to-1 | GR07G13410 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR05G03570 | 1 | ||
| Lotus japonicus | Orthologous gene family | many-to-1 | LJ5G017190 | 1 | |
| Tree-based ortholog | 1-to-1 | LJ5G017190 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ5G017190 | 1 | ||
| Malus domestica | Orthologous gene family | many-to-many | MD13G017270 MD16G013410 | 2 | |
| Tree-based ortholog | 1-to-many | MD03G023260 MD00G065580 MD00G062840 ... | 4 | ||
| Anchor point | 1-to-many | MD13G017270 MD16G013410 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD13G017270 MD16G013410 | 2 | ||
| Manihot esculenta | Orthologous gene family | many-to-many | ME01551G02750 ME02431G00200 | 2 | |
| Tree-based ortholog | 1-to-many | ME05019G00210 ME01551G02750 ME04457G01560 ... | 4 | ||
| Anchor point | 1-to-many | ME11998G01290 ME05019G00210 ME04457G01560 ... | 4 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME11998G01290 | 1 | ||
| Medicago truncatula | Orthologous gene family | many-to-1 | MT7G086500 | 1 | |
| Tree-based ortholog | 1-to-many | MT1G072650 MT7G094490 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT7G094490 | 1 | ||
| Oryza sativa ssp. japonica | Tree-based ortholog | 1-to-1 | OS07G46160 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS07G46160 | 1 | ||
| Ostreococcus lucimarinus | Tree-based ortholog | 1-to-1 | OL20G03270 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL20G03270 | 1 | ||
| Physcomitrella patens | Orthologous gene family | many-to-many | PP00148G00360 PP00205G00130 PP00349G00010 | 3 | |
| Tree-based ortholog | 1-to-many | PP00148G00360 PP00349G00010 PP00205G00130 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00205G00130 PP00349G00010 PP00148G00360 | 3 | ||
| Populus trichocarpa | Tree-based ortholog | 1-to-many | PT08G20070 PT10G02950 | 2 | |
| Anchor point | 1-to-many | PT08G20070 PT10G02950 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT08G20070 PT10G02950 | 2 | ||
| Prunus persica | Tree-based ortholog | 1-to-1 | PPE_008G25920 | 1 | |
| Anchor point | 1-to-1 | PPE_001G14170 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_008G25920 | 1 | ||
| Ricinus communis | Tree-based ortholog | 1-to-many | RC29726G00290 RC29703G00860 | 2 | |
| Anchor point | 1-to-1 | RC29726G00290 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29726G00290 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | many-to-many | SL01G080250 SL11G072070 | 2 | |
| Tree-based ortholog | 1-to-1 | SL09G072980 | 1 | ||
| Anchor point | 1-to-1 | SL01G080250 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL09G072980 | 1 | ||
| Solanum tuberosum | Orthologous gene family | many-to-many | ST01G009880 ST01G022760 ST11G028730 | 3 | |
| Tree-based ortholog | 1-to-1 | ST09G021500 | 1 | ||
| Anchor point | 1-to-1 | ST01G022760 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST09G021500 | 1 | ||
| Thellungiella parvula | Orthologous gene family | many-to-1 | TP6G25390 | 1 | |
| Tree-based ortholog | 1-to-1 | TP6G25390 | 1 | ||
| Anchor point | 1-to-many | TP3G05130 TP6G25390 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP6G25390 | 1 | ||
| Theobroma cacao | Tree-based ortholog | 1-to-many | TC0004G22280 TC0001G28310 | 2 | |
| Anchor point | 1-to-1 | TC0004G22280 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0004G22280 | 1 | ||
| Vitis vinifera | Tree-based ortholog | 1-to-many | VV07G04490 VV05G04040 | 2 | |
| Anchor point | 1-to-1 | VV05G04040 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV07G04490 | 1 | ||
| Zea mays | Tree-based ortholog | 1-to-many | ZM07G29110 ZM02G40120 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ZM07G29110 ZM02G40120 | 2 |