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Integrative Orthology Viewer:
AT5G16540
(Arabidopsis thaliana)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Arabidopsis thaliana | Orthologous gene family | AT5G16540 | 1 |  |
| Tree-based ortholog | AT5G16540 | 1 | ||
| Anchor point | AT3G02830 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | AT5G16540 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Tree-based ortholog | 1-to-1 | ATR_00013G02180 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00013G02180 | 1 | ||
| Arabidopsis lyrata | Orthologous gene family | 1-to-1 | AL6G16410 | 1 | |
| Tree-based ortholog | 1-to-1 | AL6G16410 | 1 | ||
| Anchor point | 1-to-many | AL3G02020 AL6G16410 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL6G16410 | 1 | ||
| Beta vulgaris | Tree-based ortholog | 1-to-1 | BV4G15200 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV4G15200 | 1 | ||
| Brassica rapa | Tree-based ortholog | 1-to-many | BR03G29120 BR05G35400 BR01G35480 | 3 | |
| Anchor point | 1-to-many | BR05G35400 BR03G29120 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR05G35400 | 1 | ||
| Capsella rubella | Orthologous gene family | 1-to-1 | CRU_003G01830 | 1 | |
| Tree-based ortholog | 1-to-1 | CRU_006G14370 | 1 | ||
| Anchor point | 1-to-many | CRU_001G03900 CRU_006G14370 CRU_003G01830 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_006G14370 | 1 | ||
| Carica papaya | Tree-based ortholog | 1-to-1 | CP00009G01800 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00346G00010 | 1 | ||
| Chlamydomonas reinhardtii | Tree-based ortholog | 1-to-many | CR12G08610 CR10G09270 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR08G03590 | 1 | ||
| Citrullus lanatus | Tree-based ortholog | 1-to-1 | CL03G10570 | 1 | |
| Anchor point | 1-to-1 | CL03G10570 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL03G10570 | 1 | ||
| Citrus sinensis | Tree-based ortholog | 1-to-1 | CS00299G00060 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00299G00060 | 1 | ||
| Cucumis melo | Tree-based ortholog | 1-to-1 | CM00012G00760 | 1 | |
| Anchor point | 1-to-1 | CM00012G00760 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00012G00760 | 1 | ||
| Eucalyptus grandis | Tree-based ortholog | 1-to-1 | EG0002G11570 | 1 | |
| Anchor point | 1-to-1 | EG0002G11570 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0002G11570 | 1 | ||
| Fragaria vesca | Tree-based ortholog | 1-to-1 | FV0G28040 | 1 | |
| Anchor point | 1-to-1 | FV0G28040 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV0G28040 | 1 | ||
| Glycine max | Tree-based ortholog | 1-to-many | GM20G36140 GM10G31370 GM09G38650 ... | 4 | |
| Anchor point | 1-to-many | GM18G47660 GM10G31370 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM18G47660 GM09G38650 | 2 | ||
| Gossypium raimondii | Tree-based ortholog | 1-to-many | GR12G02860 GR13G17980 GR04G26170 | 3 | |
| Anchor point | 1-to-1 | GR04G26170 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR04G26170 | 1 | ||
| Lotus japonicus | Tree-based ortholog | 1-to-1 | LJ1G034980 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ1G034980 | 1 | ||
| Malus domestica | Tree-based ortholog | 1-to-many | MD00G261050 MD00G190450 MD00G160840 | 3 | |
| Anchor point | 1-to-1 | MD12G025150 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD00G160840 | 1 | ||
| Manihot esculenta | Tree-based ortholog | 1-to-many | ME02264G00410 ME08757G00170 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME08757G00170 | 1 | ||
| Medicago truncatula | Tree-based ortholog | 1-to-1 | MT7G079840 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT7G079840 | 1 | ||
| Oryza sativa ssp. japonica | Tree-based ortholog | 1-to-many | OS01G68860 OS11G28270 OS12G21700 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS11G28270 | 1 | ||
| Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL02G00950 | 1 | |
| Physcomitrella patens | Tree-based ortholog | 1-to-many | PP00006G01460 PP00006G01420 PP00102G00770 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00006G01460 PP00102G00770 PP00006G01420 | 3 | ||
| Populus trichocarpa | Tree-based ortholog | 1-to-many | PT19G05320 PT13G08680 | 2 | |
| Anchor point | 1-to-many | PT19G05320 PT13G08680 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT19G05320 | 1 | ||
| Prunus persica | Tree-based ortholog | 1-to-1 | PPE_006G36280 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_006G36280 | 1 | ||
| Ricinus communis | Tree-based ortholog | 1-to-1 | RC30128G04150 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC30128G04150 | 1 | ||
| Solanum lycopersicum | Tree-based ortholog | 1-to-1 | SL11G008900 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL11G008900 | 1 | ||
| Solanum tuberosum | Tree-based ortholog | 1-to-1 | ST11G009810 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST11G009810 | 1 | ||
| Thellungiella parvula | Tree-based ortholog | 1-to-1 | TP3G01860 | 1 | |
| Anchor point | 1-to-1 | TP3G01860 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP3G01860 | 1 | ||
| Theobroma cacao | Tree-based ortholog | 1-to-1 | TC0005G20090 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0005G20090 | 1 | ||
| Vitis vinifera | Tree-based ortholog | 1-to-1 | VV04G03470 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV04G03470 | 1 | ||
| Zea mays | Tree-based ortholog | 1-to-many | ZM08G29230 ZM03G23090 ZM04G05120 ... | 4 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ZM02G22500 ZM04G05120 | 2 |