Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
AT5G16530
(Arabidopsis thaliana)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Arabidopsis thaliana | Orthologous gene family | AT5G16530 | 1 |  |
| Tree-based ortholog | AT5G16530 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | AT5G16530 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | 1-to-1 | ATR_00013G01980 | 1 | |
| Tree-based ortholog | 1-to-1 | ATR_00013G01980 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00013G01980 | 1 | ||
| Arabidopsis lyrata | Orthologous gene family | 1-to-1 | AL6G16400 | 1 | |
| Tree-based ortholog | 1-to-1 | AL6G16400 | 1 | ||
| Anchor point | N/A | AL6G16400 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL6G16400 | 1 | ||
| Beta vulgaris | Orthologous gene family | 1-to-1 | BV4G15180 | 1 | |
| Tree-based ortholog | 1-to-1 | BV4G15180 | 1 | ||
| Anchor point | N/A | BV4G15180 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV4G15180 | 1 | ||
| Brassica rapa | Orthologous gene family | 1-to-1 | BR10G18810 | 1 | |
| Tree-based ortholog | 1-to-1 | BR03G07000 | 1 | ||
| Anchor point | N/A | BR03G07000 BR10G18810 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR10G18810 | 1 | ||
| Capsella rubella | Orthologous gene family | 1-to-1 | CRU_006G14360 | 1 | |
| Tree-based ortholog | 1-to-1 | CRU_006G14360 | 1 | ||
| Anchor point | N/A | CRU_006G14360 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_006G14360 | 1 | ||
| Carica papaya | Orthologous gene family | 1-to-1 | CP26337G00030 | 1 | |
| Tree-based ortholog | 1-to-1 | CP26337G00030 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP26337G00030 | 1 | ||
| Citrullus lanatus | Orthologous gene family | 1-to-1 | CL02G09160 | 1 | |
| Tree-based ortholog | 1-to-1 | CL02G09160 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL02G09160 | 1 | ||
| Citrus sinensis | Orthologous gene family | 1-to-1 | CS00745G00050 | 1 | |
| Tree-based ortholog | 1-to-1 | CS00745G00050 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00745G00050 | 1 | ||
| Cucumis melo | Tree-based ortholog | 1-to-1 | CM00011G08400 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00011G08400 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | 1-to-1 | EG0002G11550 | 1 | |
| Tree-based ortholog | 1-to-many | EG0002G11530 EG0007G19780 EG0007G19770 ... | 6 | ||
| Anchor point | N/A | EG0002G11530 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0002G11550 | 1 | ||
| Fragaria vesca | Orthologous gene family | 1-to-1 | FV0G27950 | 1 | |
| Tree-based ortholog | 1-to-1 | FV0G27950 | 1 | ||
| Anchor point | N/A | FV0G27950 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV0G27950 | 1 | ||
| Glycine max | Orthologous gene family | 1-to-many | GM09G38700 GM18G47630 | 2 | |
| Tree-based ortholog | 1-to-many | GM18G47630 GM09G38700 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM18G47630 GM09G38700 | 2 | ||
| Gossypium raimondii | Orthologous gene family | 1-to-1 | GR12G02900 | 1 | |
| Tree-based ortholog | 1-to-1 | GR12G02900 | 1 | ||
| Anchor point | N/A | GR12G02900 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR12G02900 | 1 | ||
| Lotus japonicus | Orthologous gene family | 1-to-1 | LJ1G035010 | 1 | |
| Tree-based ortholog | 1-to-1 | LJ1G035010 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ1G035010 | 1 | ||
| Malus domestica | Orthologous gene family | 1-to-many | MD00G294870 MD00G366450 MD12G025140 | 3 | |
| Tree-based ortholog | 1-to-many | MD04G019780 MD00G366450 MD00G294870 ... | 4 | ||
| Anchor point | N/A | MD04G019780 MD12G025140 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD00G294870 | 1 | ||
| Manihot esculenta | Orthologous gene family | 1-to-many | ME02264G00440 ME08757G00200 | 2 | |
| Tree-based ortholog | 1-to-many | ME08757G00200 ME02264G00440 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME08757G00200 | 1 | ||
| Medicago truncatula | Orthologous gene family | 1-to-1 | MT7G079720 | 1 | |
| Tree-based ortholog | 1-to-1 | MT7G079720 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT7G079720 | 1 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | 1-to-1 | OS01G69070 | 1 | |
| Tree-based ortholog | 1-to-many | OS09G32770 OS08G41720 OS01G69070 ... | 4 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS01G69070 | 1 | ||
| Physcomitrella patens | Tree-based ortholog | 1-to-1 | PP00079G00710 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00018G00940 PP00010G00090 PP00032G00210 | 3 | ||
| Populus trichocarpa | Orthologous gene family | 1-to-many | PT00G02430 PT13G08700 PT19G05280 | 3 | |
| Tree-based ortholog | 1-to-many | PT19G05280 PT00G02430 PT13G08700 | 3 | ||
| Anchor point | N/A | PT13G08700 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT00G02430 PT13G08700 PT19G05280 | 3 | ||
| Prunus persica | Orthologous gene family | 1-to-1 | PPE_006G36250 | 1 | |
| Tree-based ortholog | 1-to-1 | PPE_006G36250 | 1 | ||
| Anchor point | N/A | PPE_006G36250 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_006G36250 | 1 | ||
| Ricinus communis | Orthologous gene family | 1-to-1 | RC30128G04110 | 1 | |
| Tree-based ortholog | 1-to-1 | RC30128G04110 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC30128G04110 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | 1-to-1 | SL01G068410 | 1 | |
| Tree-based ortholog | 1-to-many | SL04G056620 SL01G068410 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL01G068410 | 1 | ||
| Solanum tuberosum | Orthologous gene family | 1-to-1 | ST01G024710 | 1 | |
| Tree-based ortholog | 1-to-many | ST04G020050 ST01G024710 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST01G024710 | 1 | ||
| Thellungiella parvula | Orthologous gene family | 1-to-1 | TP6G27620 | 1 | |
| Tree-based ortholog | 1-to-1 | TP6G27620 | 1 | ||
| Anchor point | N/A | TP6G27620 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP6G27620 | 1 | ||
| Theobroma cacao | Orthologous gene family | 1-to-1 | TC0005G20160 | 1 | |
| Tree-based ortholog | 1-to-1 | TC0005G20160 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0005G20160 | 1 | ||
| Vitis vinifera | Orthologous gene family | 1-to-1 | VV04G03520 | 1 | |
| Tree-based ortholog | 1-to-many | VV04G03390 VV04G03520 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV04G03520 | 1 | ||
| Zea mays | Orthologous gene family | 1-to-1 | ZM03G22930 | 1 | |
| Tree-based ortholog | 1-to-many | ZM02G33190 ZM01G33690 ZM03G22930 ... | 4 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM03G22930 | 1 |