Integrative Orthology Viewer: AT5G15380 (Arabidopsis thaliana)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Arabidopsis thaliana | Orthologous gene family | AT5G14620 AT5G15380 | 2 | |
Tree-based ortholog | AT5G15380 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | AT5G15380 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | many-to-1 | ATR_00096G00430 | 1 | |
Tree-based ortholog | 1-to-1 | ATR_00096G00430 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00096G00430 | 1 | ||
Arabidopsis lyrata | Orthologous gene family | many-to-1 | AL6G14420 | 1 | |
Tree-based ortholog | 1-to-1 | AL6G14420 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL6G14420 | 1 | ||
Beta vulgaris | Orthologous gene family | many-to-many | BV2G01690 BV6G09640 | 2 | |
Tree-based ortholog | 1-to-1 | BV2G01690 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV2G01690 | 1 | ||
Brassica rapa | Orthologous gene family | many-to-many | BR02G07070 BR07G26270 BR10G20150 | 3 | |
Tree-based ortholog | 1-to-1 | BR07G26270 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR07G26270 | 1 | ||
Capsella rubella | Orthologous gene family | many-to-many | CRU_006G12510 CRU_006G13220 | 2 | |
Tree-based ortholog | 1-to-1 | CRU_006G13220 | 1 | ||
Anchor point | N/A | CRU_006G13220 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_006G13220 | 1 | ||
Carica papaya | Orthologous gene family | many-to-1 | CP00470G00020 | 1 | |
Tree-based ortholog | 1-to-1 | CP00470G00020 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00470G00020 | 1 | ||
Citrullus lanatus | Orthologous gene family | many-to-1 | CL10G12180 | 1 | |
Tree-based ortholog | 1-to-1 | CL10G12180 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL10G12180 | 1 | ||
Citrus sinensis | Orthologous gene family | many-to-1 | CS00028G00020 | 1 | |
Tree-based ortholog | 1-to-1 | CS00028G00020 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00028G00020 | 1 | ||
Cucumis melo | Orthologous gene family | many-to-1 | CM00011G09230 | 1 | |
Tree-based ortholog | 1-to-1 | CM00011G09230 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00011G09230 | 1 | ||
Eucalyptus grandis | Orthologous gene family | many-to-1 | EG0010G19260 | 1 | |
Tree-based ortholog | 1-to-many | EG0010G19260 EG0010G19080 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0010G19260 | 1 | ||
Fragaria vesca | Orthologous gene family | many-to-many | FV0G39070 FV6G17350 FV6G17590 | 3 | |
Tree-based ortholog | 1-to-many | FV6G17350 FV6G17590 FV0G39070 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | FV6G17590 FV6G17350 FV0G39070 | 3 | ||
Glycine max | Orthologous gene family | many-to-many | GM02G04060 GM05G08740 GM19G00250 | 3 | |
Tree-based ortholog | 1-to-many | GM05G08740 GM19G00250 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM19G00250 GM05G08740 | 2 | ||
Gossypium raimondii | Orthologous gene family | many-to-many | GR06G03100 GR12G06290 | 2 | |
Tree-based ortholog | 1-to-many | GR12G06290 GR06G03100 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR06G03100 | 1 | ||
Lotus japonicus | Orthologous gene family | many-to-1 | LJ2G024510 | 1 | |
Tree-based ortholog | 1-to-1 | LJ2G024510 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ2G024510 | 1 | ||
Malus domestica | Orthologous gene family | many-to-1 | MD17G002400 | 1 | |
Tree-based ortholog | 1-to-1 | MD17G002400 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD17G002400 | 1 | ||
Manihot esculenta | Orthologous gene family | many-to-many | ME04137G00070 ME05335G00460 | 2 | |
Tree-based ortholog | 1-to-many | ME05335G00460 ME04137G00070 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME05335G00460 | 1 | ||
Medicago truncatula | Orthologous gene family | many-to-many | MT3G011150 MT5G019420 MT6G005580 | 3 | |
Tree-based ortholog | 1-to-many | MT3G011150 MT5G019420 MT6G005580 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MT6G005580 MT5G019420 MT3G011150 | 3 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS03G02010 OS12G01800 | 2 | |
Tree-based ortholog | 1-to-many | OS11G01810 OS12G01800 OS03G02010 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS03G02010 | 1 | ||
Physcomitrella patens | Orthologous gene family | many-to-many | PP00104G00630 PP00271G00010 | 2 | |
Tree-based ortholog | 1-to-many | PP00104G00630 PP00271G00010 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00104G00630 PP00271G00010 | 2 | ||
Populus trichocarpa | Orthologous gene family | many-to-1 | PT01G34700 | 1 | |
Tree-based ortholog | 1-to-1 | PT01G34700 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT01G34700 | 1 | ||
Prunus persica | Orthologous gene family | many-to-many | PPE_003G26490 PPE_008G04160 | 2 | |
Tree-based ortholog | 1-to-many | PPE_003G26490 PPE_008G04160 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PPE_003G26490 PPE_008G04160 | 2 | ||
Ricinus communis | Orthologous gene family | many-to-many | RC29631G00490 RC29917G00510 | 2 | |
Tree-based ortholog | 1-to-1 | RC29917G00510 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29917G00510 | 1 | ||
Solanum lycopersicum | Orthologous gene family | many-to-many | SL00G012640 SL02G062740 SL04G005250 ... | 4 | |
Tree-based ortholog | 1-to-many | SL10G078190 SL02G062740 SL04G005250 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL10G078190 | 1 | ||
Solanum tuberosum | Orthologous gene family | many-to-many | ST02G010360 ST10G019600 | 2 | |
Tree-based ortholog | 1-to-many | ST10G019600 ST02G010360 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST10G019600 | 1 | ||
Thellungiella parvula | Orthologous gene family | many-to-many | TP5G24600 TP6G29410 | 2 | |
Tree-based ortholog | 1-to-1 | TP5G24600 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP5G24600 | 1 | ||
Theobroma cacao | Orthologous gene family | many-to-1 | TC0004G01220 | 1 | |
Tree-based ortholog | 1-to-1 | TC0004G01220 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0004G01220 | 1 | ||
Vitis vinifera | Orthologous gene family | many-to-1 | VV14G11390 | 1 | |
Tree-based ortholog | 1-to-1 | VV14G11390 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV14G11390 | 1 | ||
Zea mays | Orthologous gene family | many-to-many | ZM01G00800 ZM09G29490 | 2 | |
Tree-based ortholog | 1-to-many | ZM09G29490 ZM01G00800 ZM03G37320 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ZM01G00800 ZM09G29490 | 2 |