Integrative Orthology Viewer: AT5G13110 (Arabidopsis thaliana)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Arabidopsis thaliana | Orthologous gene family | AT1G24280 AT5G13110 | 2 | |
Tree-based ortholog | AT5G13110 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | AT5G13110 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | many-to-many | ATR_00016G02220 ATR_00047G00340 | 2 | |
Tree-based ortholog | 1-to-1 | ATR_00016G02220 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00016G02220 | 1 | ||
Arabidopsis lyrata | Orthologous gene family | many-to-1 | AL1G09110 | 1 | |
Tree-based ortholog | 1-to-1 | AL6G12820 | 1 | ||
Anchor point | N/A | AL6G12820 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL6G12820 | 1 | ||
Beta vulgaris | Orthologous gene family | many-to-1 | BV4G08950 | 1 | |
Tree-based ortholog | 1-to-1 | BV6G11190 | 1 | ||
Anchor point | N/A | BV6G11190 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV6G11190 | 1 | ||
Brassica rapa | Orthologous gene family | many-to-1 | BR08G29310 | 1 | |
Tree-based ortholog | 1-to-many | BR03G05200 BR10G21210 | 2 | ||
Anchor point | N/A | BR09G02370 BR03G05200 BR10G21210 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR03G05200 | 1 | ||
Capsella rubella | Orthologous gene family | many-to-many | CRU_001G24750 CRU_006G10960 CRU_007G30210 | 3 | |
Tree-based ortholog | 1-to-1 | CRU_006G10960 | 1 | ||
Anchor point | N/A | CRU_006G10960 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_006G10960 | 1 | ||
Carica papaya | Orthologous gene family | many-to-1 | CP00211G00230 | 1 | |
Tree-based ortholog | 1-to-1 | CP00099G00500 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00211G00230 | 1 | ||
Chlamydomonas reinhardtii | Tree-based ortholog | 1-to-1 | CR08G05490 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR08G05490 | 1 | ||
Citrullus lanatus | Orthologous gene family | many-to-1 | CL04G02690 | 1 | |
Tree-based ortholog | 1-to-1 | CL04G02690 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL04G02690 | 1 | ||
Citrus sinensis | Orthologous gene family | many-to-1 | CS00003G00200 | 1 | |
Tree-based ortholog | 1-to-1 | CS00003G00200 | 1 | ||
Anchor point | N/A | CS00003G00200 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00003G00200 | 1 | ||
Eucalyptus grandis | Orthologous gene family | many-to-1 | EG0008G11270 | 1 | |
Tree-based ortholog | 1-to-1 | EG0002G29350 | 1 | ||
Anchor point | N/A | EG0002G29350 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0002G29350 | 1 | ||
Fragaria vesca | Orthologous gene family | many-to-1 | FV6G32540 | 1 | |
Tree-based ortholog | 1-to-1 | FV0G13290 | 1 | ||
Anchor point | N/A | FV0G13290 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV0G13290 | 1 | ||
Glycine max | Orthologous gene family | many-to-many | GM02G10710 GM07G01630 GM08G21270 ... | 4 | |
Tree-based ortholog | 1-to-many | GM02G10710 GM18G52110 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM02G10710 GM18G52110 | 2 | ||
Gossypium raimondii | Orthologous gene family | many-to-many | GR02G02320 GR05G19400 GR07G16650 | 3 | |
Tree-based ortholog | 1-to-many | GR02G02320 GR05G19400 | 2 | ||
Anchor point | N/A | GR02G02320 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR02G02320 | 1 | ||
Lotus japonicus | Tree-based ortholog | 1-to-1 | LJ1G040210 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ1G040210 | 1 | ||
Malus domestica | Orthologous gene family | many-to-1 | MD04G015420 | 1 | |
Tree-based ortholog | 1-to-1 | MD04G015420 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD04G015420 | 1 | ||
Manihot esculenta | Orthologous gene family | many-to-many | ME02815G00070 ME03219G00410 ME06711G00560 | 3 | |
Tree-based ortholog | 1-to-many | ME03219G00410 ME06711G00560 | 2 | ||
Anchor point | N/A | ME06711G00560 ME03219G00410 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ME06711G00560 ME03219G00410 | 2 | ||
Medicago truncatula | Orthologous gene family | many-to-1 | MT7G022440 | 1 | |
Tree-based ortholog | 1-to-1 | MT7G022440 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT7G022440 | 1 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS03G29950 OS07G22350 | 2 | |
Tree-based ortholog | 1-to-1 | OS07G22350 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS07G22350 | 1 | ||
Ostreococcus lucimarinus | Tree-based ortholog | 1-to-1 | OL05G04550 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL05G04550 | 1 | ||
Physcomitrella patens | Orthologous gene family | many-to-many | PP00031G00750 PP00059G01170 PP00338G00330 | 3 | |
Tree-based ortholog | 1-to-many | PP00338G00330 PP00051G01280 PP00059G01170 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00051G01280 PP00059G01170 PP00036G00590 ... | 4 | ||
Populus trichocarpa | Orthologous gene family | many-to-many | PT01G05990 PT03G16800 PT14G16680 | 3 | |
Tree-based ortholog | 1-to-many | PT01G05990 PT03G16800 | 2 | ||
Anchor point | N/A | PT01G05990 PT03G16800 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT01G05990 PT03G16800 | 2 | ||
Prunus persica | Orthologous gene family | many-to-many | PPE_001G23140 PPE_003G18020 | 2 | |
Tree-based ortholog | 1-to-1 | PPE_001G23140 | 1 | ||
Anchor point | N/A | PPE_001G23140 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_001G23140 | 1 | ||
Ricinus communis | Tree-based ortholog | 1-to-1 | RC29929G01140 | 1 | |
Anchor point | N/A | RC29929G01140 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29929G01140 | 1 | ||
Solanum lycopersicum | Tree-based ortholog | 1-to-1 | SL05G015950 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL05G015950 | 1 | ||
Solanum tuberosum | Orthologous gene family | many-to-1 | ST07G017230 | 1 | |
Tree-based ortholog | 1-to-1 | ST05G021030 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST05G021030 | 1 | ||
Thellungiella parvula | Orthologous gene family | many-to-many | TP1G23480 TP6G30870 TP7G06340 | 3 | |
Tree-based ortholog | 1-to-1 | TP6G30870 | 1 | ||
Anchor point | N/A | TP6G30870 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP6G30870 | 1 | ||
Theobroma cacao | Orthologous gene family | many-to-many | TC0001G18930 TC0002G19680 | 2 | |
Tree-based ortholog | 1-to-1 | TC0002G19680 | 1 | ||
Anchor point | N/A | TC0002G19680 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0002G19680 | 1 | ||
Vitis vinifera | Orthologous gene family | many-to-many | VV01G00670 VV12G09690 | 2 | |
Tree-based ortholog | 1-to-1 | VV01G00670 | 1 | ||
Anchor point | N/A | VV01G00670 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV01G00670 | 1 | ||
Zea mays | Orthologous gene family | many-to-many | ZM01G18010 ZM09G22030 | 2 | |
Tree-based ortholog | 1-to-1 | ZM10G13830 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM10G13830 | 1 |