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Integrative Orthology Viewer:
AT5G12140
(Arabidopsis thaliana)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Arabidopsis thaliana | Orthologous gene family | AT5G12140 | 1 |  |
| Tree-based ortholog | AT5G12140 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | AT5G12140 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Tree-based ortholog | 1-to-many | ATR_00101G00760 ATR_00214G00030 ATR_00055G00780 ... | 6 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00101G00760 | 1 | ||
| Arabidopsis lyrata | Orthologous gene family | 1-to-1 | AL6G12010 | 1 | |
| Tree-based ortholog | 1-to-1 | AL6G12010 | 1 | ||
| Anchor point | N/A | AL6G12010 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL6G12010 | 1 | ||
| Beta vulgaris | Tree-based ortholog | 1-to-many | BV4G14350 BV4G14270 BV2G14230 ... | 7 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV2G14230 | 1 | ||
| Brassica rapa | Orthologous gene family | 1-to-many | BR02G05920 BR10G21780 | 2 | |
| Tree-based ortholog | 1-to-many | BR02G05920 BR10G21780 | 2 | ||
| Anchor point | N/A | BR02G05920 BR10G21780 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | BR02G05920 BR10G21780 | 2 | ||
| Capsella rubella | Orthologous gene family | 1-to-1 | CRU_006G10370 | 1 | |
| Tree-based ortholog | 1-to-1 | CRU_006G10370 | 1 | ||
| Anchor point | N/A | CRU_006G10370 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_006G10370 | 1 | ||
| Carica papaya | Tree-based ortholog | 1-to-many | CP00034G01960 CP00034G01950 CP00034G01930 ... | 7 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | CP00034G01950 CP00034G01970 CP00034G01960 ... | 4 | ||
| Citrullus lanatus | Tree-based ortholog | 1-to-many | CL03G14010 CL04G05820 CL11G07260 ... | 13 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL11G07260 | 1 | ||
| Citrus sinensis | Tree-based ortholog | 1-to-many | CS00416G00010 CS01901G00010 CS00091G00730 ... | 7 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00091G00730 | 1 | ||
| Cucumis melo | Tree-based ortholog | 1-to-many | CM00036G00930 CM00016G01040 CM00080G00350 ... | 9 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00016G01040 | 1 | ||
| Eucalyptus grandis | Tree-based ortholog | 1-to-many | EG0002G31490 EG0001G18260 EG0001G18310 ... | 11 | |
| Anchor point | N/A | EG0010G05840 EG0002G31490 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | EG0001G18290 EG0001G18310 EG0001G18260 | 3 | ||
| Fragaria vesca | Tree-based ortholog | 1-to-many | FV7G19590 FV7G19670 FV6G14940 ... | 12 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV7G19590 | 1 | ||
| Glycine max | Tree-based ortholog | 1-to-many | GM15G36180 GM13G25870 GM14G04291 ... | 21 | |
| Anchor point | N/A | GM14G04250 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GM14G04250 | 1 | ||
| Gossypium raimondii | Tree-based ortholog | 1-to-many | GR06G12350 GR10G21530 GR10G21540 ... | 12 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR06G12350 | 1 | ||
| Lotus japonicus | Tree-based ortholog | 1-to-many | LJ1G056400 LJ3G026610 LJ6G021370 ... | 4 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ3G026610 | 1 | ||
| Malus domestica | Tree-based ortholog | 1-to-many | MD02G025980 MD00G488520 MD07G002920 ... | 29 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD07G002900 MD07G002920 MD00G488520 | 3 | ||
| Manihot esculenta | Tree-based ortholog | 1-to-many | ME06916G00860 ME08494G00120 ME05875G01930 ... | 8 | |
| Anchor point | N/A | ME06916G00860 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME06916G00860 | 1 | ||
| Medicago truncatula | Tree-based ortholog | 1-to-many | MT8G041410 MT3G452280 MT3G451210 ... | 32 | |
| Anchor point | N/A | MT5G088770 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT3G043750 | 1 | ||
| Oryza sativa ssp. japonica | Tree-based ortholog | 1-to-1 | OS01G58890 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS01G16430 | 1 | ||
| Physcomitrella patens | Tree-based ortholog | 1-to-many | PP00212G00060 PP00066G01120 PP00238G00250 ... | 4 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00066G01120 PP00238G00250 PP00212G00060 | 3 | ||
| Populus trichocarpa | Tree-based ortholog | 1-to-many | PT01G22580 PT09G02230 PT06G03320 ... | 11 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT09G02230 | 1 | ||
| Prunus persica | Tree-based ortholog | 1-to-many | PPE_002G03460 PPE_004G00820 PPE_007G02850 ... | 8 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_002G03480 | 1 | ||
| Ricinus communis | Tree-based ortholog | 1-to-many | RC29785G00180 RC29940G00040 RC29686G00150 ... | 5 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29785G00180 | 1 | ||
| Solanum lycopersicum | Tree-based ortholog | 1-to-many | SL01G009020 SL03G097270 SL00G071180 ... | 7 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL01G009020 | 1 | ||
| Solanum tuberosum | Tree-based ortholog | 1-to-many | ST01G009830 ST03G017970 ST06G027390 ... | 13 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST01G009830 | 1 | ||
| Thellungiella parvula | Orthologous gene family | 1-to-1 | TP6G31490 | 1 | |
| Tree-based ortholog | 1-to-1 | TP6G31490 | 1 | ||
| Anchor point | N/A | TP6G31490 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP6G31490 | 1 | ||
| Theobroma cacao | Tree-based ortholog | 1-to-many | TC0009G24780 TC0005G12320 TC0010G13740 ... | 5 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0010G13740 | 1 | ||
| Vitis vinifera | Tree-based ortholog | 1-to-many | VV08G03810 VV00G05660 VV06G11580 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV08G03810 | 1 | ||
| Zea mays | Tree-based ortholog | 1-to-1 | ZM03G29280 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ZM08G33320 ZM03G29280 | 2 |