Integrative Orthology Viewer: AT5G08300 (Arabidopsis thaliana)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Arabidopsis thaliana | Orthologous gene family | AT5G08300 AT5G23250 | 2 | |
Tree-based ortholog | AT5G08300 | 1 | ||
Anchor point | AT5G23250 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | AT5G08300 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | many-to-1 | ATR_00029G00460 | 1 | |
Tree-based ortholog | 1-to-1 | ATR_00029G00460 | 1 | ||
Anchor point | 1-to-1 | ATR_00029G00460 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00029G00460 | 1 | ||
Arabidopsis lyrata | Orthologous gene family | many-to-many | AL6G08020 AL6G23020 | 2 | |
Tree-based ortholog | 1-to-1 | AL6G08020 | 1 | ||
Anchor point | 1-to-many | AL6G23020 AL6G08020 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL6G08020 | 1 | ||
Beta vulgaris | Orthologous gene family | many-to-1 | BV9G11040 | 1 | |
Tree-based ortholog | 1-to-1 | BV9G11040 | 1 | ||
Anchor point | 1-to-1 | BV9G11040 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV9G11040 | 1 | ||
Brassica rapa | Orthologous gene family | many-to-many | BR02G05010 BR03G03220 BR03G40270 ... | 4 | |
Tree-based ortholog | 1-to-many | BR03G03220 BR10G26020 | 2 | ||
Anchor point | 1-to-many | BR10G26020 BR03G03220 BR02G05010 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR10G26020 | 1 | ||
Capsella rubella | Orthologous gene family | many-to-many | CRU_006G07030 CRU_006G20390 | 2 | |
Tree-based ortholog | 1-to-1 | CRU_006G07030 | 1 | ||
Anchor point | 1-to-many | CRU_006G20390 CRU_006G07030 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_006G07030 | 1 | ||
Carica papaya | Orthologous gene family | many-to-1 | CP00000G01130 | 1 | |
Tree-based ortholog | 1-to-1 | CP00000G01130 | 1 | ||
Anchor point | 1-to-1 | CP00000G01130 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00000G01130 | 1 | ||
Chlamydomonas reinhardtii | Orthologous gene family | many-to-1 | CR03G11360 | 1 | |
Tree-based ortholog | 1-to-1 | CR03G11360 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR03G11360 | 1 | ||
Citrullus lanatus | Orthologous gene family | many-to-1 | CL01G09040 | 1 | |
Tree-based ortholog | 1-to-1 | CL01G09040 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL01G09040 | 1 | ||
Citrus sinensis | Orthologous gene family | many-to-1 | CS00157G00170 | 1 | |
Tree-based ortholog | 1-to-1 | CS00157G00170 | 1 | ||
Anchor point | 1-to-1 | CS00157G00170 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00157G00170 | 1 | ||
Cucumis melo | Orthologous gene family | many-to-1 | CM00001G02640 | 1 | |
Tree-based ortholog | 1-to-1 | CM00001G02640 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00001G02640 | 1 | ||
Eucalyptus grandis | Orthologous gene family | many-to-many | EG0008G05540 EG0010G07580 | 2 | |
Tree-based ortholog | 1-to-many | EG0010G07580 EG0008G05540 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0010G07580 | 1 | ||
Fragaria vesca | Orthologous gene family | many-to-1 | FV5G15490 | 1 | |
Tree-based ortholog | 1-to-1 | FV5G15490 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV5G15490 | 1 | ||
Glycine max | Orthologous gene family | many-to-many | GM09G29460 GM16G33870 | 2 | |
Tree-based ortholog | 1-to-many | GM16G33870 GM09G29460 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GM16G33870 | 1 | ||
Gossypium raimondii | Orthologous gene family | many-to-many | GR05G21120 GR13G06920 | 2 | |
Tree-based ortholog | 1-to-many | GR05G21120 GR13G06920 | 2 | ||
Anchor point | 1-to-many | GR05G21120 GR13G06920 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR13G06920 | 1 | ||
Lotus japonicus | Orthologous gene family | many-to-1 | LJ2G007800 | 1 | |
Tree-based ortholog | 1-to-1 | LJ2G007800 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ2G007800 | 1 | ||
Malus domestica | Orthologous gene family | many-to-many | MD06G020570 MD14G022860 | 2 | |
Tree-based ortholog | 1-to-many | MD06G020570 MD14G022860 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD06G020570 | 1 | ||
Manihot esculenta | Orthologous gene family | many-to-1 | ME02455G00010 | 1 | |
Tree-based ortholog | 1-to-1 | ME02455G00010 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME02455G00010 | 1 | ||
Medicago truncatula | Orthologous gene family | many-to-1 | MT6G077820 | 1 | |
Tree-based ortholog | 1-to-1 | MT6G077820 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT6G077820 | 1 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-1 | OS07G38970 | 1 | |
Tree-based ortholog | 1-to-1 | OS07G38970 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS07G38970 | 1 | ||
Ostreococcus lucimarinus | Orthologous gene family | many-to-1 | OL03G05860 | 1 | |
Tree-based ortholog | 1-to-1 | OL03G05860 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL03G05860 | 1 | ||
Physcomitrella patens | Orthologous gene family | many-to-many | PP00058G00400 PP00079G00980 | 2 | |
Tree-based ortholog | 1-to-many | PP00079G00980 PP00058G00400 PP00282G00020 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00079G00980 PP00058G00400 | 2 | ||
Populus trichocarpa | Orthologous gene family | many-to-many | PT05G09140 PT12G03620 PT15G02820 | 3 | |
Tree-based ortholog | 1-to-many | PT15G02820 PT12G03620 PT05G09140 | 3 | ||
Anchor point | 1-to-1 | PT05G09140 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT05G09140 | 1 | ||
Prunus persica | Orthologous gene family | many-to-1 | PPE_005G24440 | 1 | |
Tree-based ortholog | 1-to-1 | PPE_005G24440 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_005G24440 | 1 | ||
Ricinus communis | Orthologous gene family | many-to-many | RC30189G00400 RC30189G00410 | 2 | |
Tree-based ortholog | 1-to-many | RC30189G00410 RC30189G00400 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | RC30189G00410 RC30189G00400 | 2 | ||
Solanum lycopersicum | Orthologous gene family | many-to-many | SL01G007910 SL02G005350 | 2 | |
Tree-based ortholog | 1-to-many | SL01G007910 SL02G005350 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL01G007910 | 1 | ||
Solanum tuberosum | Orthologous gene family | many-to-many | ST01G008180 ST02G006770 | 2 | |
Tree-based ortholog | 1-to-many | ST01G008180 ST02G006770 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST01G008180 | 1 | ||
Thellungiella parvula | Orthologous gene family | many-to-many | TP2G23900 TP6G34660 | 2 | |
Tree-based ortholog | 1-to-1 | TP6G34660 | 1 | ||
Anchor point | 1-to-many | TP6G34660 TP2G23900 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP6G34660 | 1 | ||
Theobroma cacao | Orthologous gene family | many-to-1 | TC0002G15220 | 1 | |
Tree-based ortholog | 1-to-1 | TC0002G15220 | 1 | ||
Anchor point | 1-to-1 | TC0002G15220 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0002G15220 | 1 | ||
Vitis vinifera | Orthologous gene family | many-to-many | VV10G06880 VV17G09600 | 2 | |
Tree-based ortholog | 1-to-many | VV10G06880 VV17G09600 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV17G09600 | 1 | ||
Zea mays | Orthologous gene family | many-to-many | ZM02G37560 ZM07G25290 | 2 | |
Tree-based ortholog | 1-to-many | ZM07G25290 ZM02G37560 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM07G25290 | 1 |