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Integrative Orthology Viewer:
AT4G39030
(Arabidopsis thaliana)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Arabidopsis thaliana | Orthologous gene family | AT2G21340 AT4G39030 | 2 |  |
| Tree-based ortholog | AT4G39030 | 1 | ||
| Anchor point | AT2G21340 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | AT4G39030 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | many-to-many | ATR_00001G02030 ATR_00001G02170 | 2 | |
| Tree-based ortholog | 1-to-many | ATR_00001G02030 ATR_00001G02170 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00001G02030 | 1 | ||
| Arabidopsis lyrata | Orthologous gene family | many-to-many | AL4G00510 AL7G00950 | 2 | |
| Tree-based ortholog | 1-to-1 | AL7G00950 | 1 | ||
| Anchor point | 1-to-many | AL7G00950 AL4G00510 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL7G00950 | 1 | ||
| Beta vulgaris | Orthologous gene family | many-to-many | BV9G12650 BV9G12670 | 2 | |
| Tree-based ortholog | 1-to-many | BV9G12650 BV9G12670 | 2 | ||
| Anchor point | 1-to-1 | BV9G12650 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV9G12670 | 1 | ||
| Brassica rapa | Orthologous gene family | many-to-many | BR01G00220 BR03G24310 BR09G44660 | 3 | |
| Tree-based ortholog | 1-to-1 | BR01G00220 | 1 | ||
| Anchor point | 1-to-1 | BR01G00220 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR01G00220 | 1 | ||
| Capsella rubella | Orthologous gene family | many-to-many | CRU_004G00390 CRU_007G00820 | 2 | |
| Tree-based ortholog | 1-to-1 | CRU_007G00820 | 1 | ||
| Anchor point | 1-to-many | CRU_007G00820 CRU_004G00390 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_007G00820 | 1 | ||
| Carica papaya | Orthologous gene family | many-to-1 | CP00150G00360 | 1 | |
| Tree-based ortholog | 1-to-1 | CP00150G00360 | 1 | ||
| Anchor point | 1-to-1 | CP00150G00360 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00150G00360 | 1 | ||
| Chlamydomonas reinhardtii | Orthologous gene family | many-to-1 | CR03G08070 | 1 | |
| Tree-based ortholog | 1-to-1 | CR03G08070 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR03G08070 | 1 | ||
| Citrullus lanatus | Orthologous gene family | many-to-many | CL11G14920 CL11G14930 | 2 | |
| Tree-based ortholog | 1-to-many | CL11G14930 CL11G14920 | 2 | ||
| Anchor point | 1-to-1 | CL11G14920 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL11G14930 | 1 | ||
| Citrus sinensis | Orthologous gene family | many-to-many | CS00474G00040 CS00474G00050 | 2 | |
| Tree-based ortholog | 1-to-many | CS00474G00050 CS00474G00040 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00474G00040 | 1 | ||
| Cucumis melo | Orthologous gene family | many-to-many | CM00059G01640 CM00059G01650 | 2 | |
| Tree-based ortholog | 1-to-many | CM00059G01650 CM00059G01640 | 2 | ||
| Anchor point | 1-to-1 | CM00059G01640 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00059G01640 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | many-to-many | EG0007G12590 EG0009G10530 | 2 | |
| Tree-based ortholog | 1-to-many | EG0009G10520 EG3146G00010 EG0007G12590 ... | 4 | ||
| Anchor point | 1-to-many | EG0007G12590 EG0009G10520 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0007G12590 | 1 | ||
| Fragaria vesca | Orthologous gene family | many-to-many | FV2G16890 FV2G16900 | 2 | |
| Tree-based ortholog | 1-to-many | FV2G16900 FV2G16890 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV2G16890 | 1 | ||
| Glycine max | Orthologous gene family | many-to-many | GM11G11970 GM11G11990 | 2 | |
| Tree-based ortholog | 1-to-many | GM11G11970 GM11G11990 | 2 | ||
| Anchor point | 1-to-many | GM11G11970 GM12G04228 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM11G11990 GM11G11970 | 2 | ||
| Gossypium raimondii | Orthologous gene family | many-to-many | GR05G24740 GR05G24750 GR05G24760 | 3 | |
| Tree-based ortholog | 1-to-many | GR05G24750 GR05G24740 GR05G24760 | 3 | ||
| Anchor point | 1-to-1 | GR05G24740 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR05G24750 | 1 | ||
| Lotus japonicus | Orthologous gene family | many-to-many | LJ3G047580 LJ3G047590 LJ3G047600 | 3 | |
| Tree-based ortholog | 1-to-many | LJ3G047590 LJ3G047600 LJ3G047580 | 3 | ||
| Anchor point | 1-to-1 | LJ3G047580 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ3G047580 | 1 | ||
| Malus domestica | Orthologous gene family | many-to-many | MD00G505810 MD02G000610 | 2 | |
| Tree-based ortholog | 1-to-many | MD02G000610 MD00G505810 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD00G505810 | 1 | ||
| Manihot esculenta | Orthologous gene family | many-to-many | ME02994G00270 ME03116G00100 ME03116G00110 | 3 | |
| Tree-based ortholog | 1-to-many | ME03116G00110 ME02994G00270 ME03116G00100 | 3 | ||
| Anchor point | 1-to-1 | ME02994G00270 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME03116G00100 | 1 | ||
| Medicago truncatula | Orthologous gene family | many-to-many | MT4G071370 MT4G071390 MT4G071420 ... | 5 | |
| Tree-based ortholog | 1-to-many | MT4G071370 MT4G071390 MT4G071445 ... | 5 | ||
| Anchor point | 1-to-1 | MT4G071370 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MT4G071445 MT4G071465 MT4G071420 | 3 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | many-to-1 | OS02G02980 | 1 | |
| Tree-based ortholog | 1-to-1 | OS02G02980 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS02G02980 | 1 | ||
| Ostreococcus lucimarinus | Orthologous gene family | many-to-1 | OL16G01470 | 1 | |
| Tree-based ortholog | 1-to-many | OL16G01470 OL05G04790 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL16G01470 | 1 | ||
| Physcomitrella patens | Orthologous gene family | many-to-many | PP00047G01430 PP00058G00210 PP00142G00620 | 3 | |
| Tree-based ortholog | 1-to-many | PP00058G00210 PP00047G01430 PP00142G00620 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00047G01430 PP00058G00210 PP00142G00620 | 3 | ||
| Populus trichocarpa | Orthologous gene family | many-to-many | PT09G12260 PT09G12290 | 2 | |
| Tree-based ortholog | 1-to-many | PT09G12260 PT09G12290 | 2 | ||
| Anchor point | 1-to-1 | PT09G12260 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT09G12260 | 1 | ||
| Prunus persica | Orthologous gene family | many-to-many | PPE_008G10490 PPE_008G10520 | 2 | |
| Tree-based ortholog | 1-to-many | PPE_008G10520 PPE_008G10490 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PPE_008G10490 PPE_008G10520 | 2 | ||
| Ricinus communis | Orthologous gene family | many-to-many | RC30131G02580 RC30131G02590 RC30131G02600 | 3 | |
| Tree-based ortholog | 1-to-many | RC30131G02580 RC30131G02600 RC30131G02590 | 3 | ||
| Anchor point | 1-to-1 | RC30131G02580 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC30131G02590 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | many-to-1 | SL01G110280 | 1 | |
| Tree-based ortholog | 1-to-many | SL10G054110 SL01G110280 | 2 | ||
| Anchor point | 1-to-many | SL10G054100 SL01G110280 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL01G110280 | 1 | ||
| Solanum tuberosum | Orthologous gene family | many-to-many | ST01G047710 ST10G018080 | 2 | |
| Tree-based ortholog | 1-to-many | ST10G018080 ST01G047700 ST01G047710 | 3 | ||
| Anchor point | 1-to-1 | ST01G047700 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST01G047700 | 1 | ||
| Thellungiella parvula | Orthologous gene family | many-to-many | TP4G00520 TP7G36800 | 2 | |
| Tree-based ortholog | 1-to-1 | TP7G36800 | 1 | ||
| Anchor point | 1-to-many | TP4G00520 TP7G36800 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP7G36800 | 1 | ||
| Theobroma cacao | Orthologous gene family | many-to-many | TC0002G07340 TC0002G07360 | 2 | |
| Tree-based ortholog | 1-to-many | TC0002G07360 TC0002G07340 | 2 | ||
| Anchor point | 1-to-1 | TC0002G07340 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0002G07340 | 1 | ||
| Vitis vinifera | Orthologous gene family | many-to-many | VV03G06100 VV03G06110 | 2 | |
| Tree-based ortholog | 1-to-many | VV03G06100 VV03G06110 | 2 | ||
| Anchor point | 1-to-1 | VV03G06110 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV03G06110 | 1 | ||
| Zea mays | Orthologous gene family | many-to-1 | ZM05G17920 | 1 | |
| Tree-based ortholog | 1-to-1 | ZM05G17920 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM05G17920 | 1 |